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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125585614   chlorophyll a-b binding protein 1, chloroplastic-like 
 bna-r.1   106401200   chlorophyll a-b binding protein 2.4, chloroplastic 
 bna-r.1   106349237   chlorophyll a-b binding protein 2.4, chloroplastic 
 bra-r.6   103837002   chlorophyll a-b binding protein 2.4, chloroplastic 
 bra-r.6   103828916   chlorophyll a-b binding protein 1, chloroplastic 
 bra-r.6   103828920   chlorophyll a-b binding protein 1, chloroplastic-like 
 ath-u.5   LHCB2.3   photosystem II light harvesting complex protein 2.3 
 ath-u.5   CAB2   chlorophyll A/B-binding protein 2 
 ath-u.5   LHB1B1   light-harvesting chlorophyll-protein complex II subunit B1 
 ghi-r.1   107899358   chlorophyll a-b binding protein 151, chloroplastic-like 
 ghi-r.1   107955021   chlorophyll a-b binding protein 151, chloroplastic 
 ghi-r.1   107954948   chlorophyll a-b binding protein 151, chloroplastic 
 cit-r.1   102610533   chlorophyll a-b binding protein 151, chloroplastic 
 cit-r.1   102626435   chlorophyll a-b binding protein of LHCII type 1 
 cit-r.1   102625299   chlorophyll a-b binding protein of LHCII type 1 
 gma-u.5   100793702   chlorophyll a-b binding protein 151, chloroplastic-like 
 gma-u.5   100805310   chlorophyll a-b binding protein 3, chloroplastic-like 
 gma-u.5   100815789   chlorophyll a-b binding protein 
 vvi-u.5   100254533   chlorophyll a-b binding protein 151, chloroplastic-like 
 vvi-u.5   100245214   chlorophyll a-b binding protein 40, chloroplastic-like 
 ppo-u.5   7455996   chlorophyll a-b binding protein 151, chloroplastic 
 ppo-u.5   7493970   chlorophyll a-b binding protein of LHCII type 1 
 ppo-u.5   7493971   chlorophyll a-b binding protein of LHCII type 1 
 mtr-u.5   11434875   chlorophyll a-b binding protein 215, chloroplastic 
 mtr-u.5   25495306   chlorophyll a-b binding protein of LHCII type 1 
 mtr-u.5   25495305   chlorophyll a-b binding protein of LHCII type 1 
 sly-u.5   101265886   chlorophyll a-b binding protein 1C, chloroplastic 
 sly-u.5   CAB1B   chlorophyll a/b-binding protein Cab-1B 
 sot-r.1   102593779   chlorophyll a-b binding protein 1C, chloroplastic 
 sot-r.1   102594074   chlorophyll a-b binding protein 4, chloroplastic 
 sot-r.1   102594652   chlorophyll a-b binding protein 1C, chloroplastic 
 nta-r.1   107778264   chlorophyll a-b binding protein 37, chloroplastic 
 nta-r.1   107776229   chlorophyll a-b binding protein 21, chloroplastic 
 nta-r.1   107775016   chlorophyll a-b binding protein 40, chloroplastic 
 osa-u.5   4324599   chlorophyll a-b binding protein 2, chloroplastic-like 
 osa-u.5   4346803   chlorophyll a-b binding protein 1, chloroplastic-like 
 osa-u.5   4333359   chlorophyll a-b binding protein, chloroplastic-like 
 zma-u.5   100274453   light harvesting chlorophyll a/b binding protein1 
 zma-u.5   100281248   chlorophyll a-b binding protein 2 
 zma-u.5   100281879   chlorophyll a-b binding protein 
 tae-r.2   123182882   chlorophyll a-b binding protein of LHCII type 1 
 tae-r.2   123182881   chlorophyll a-b binding protein of LHCII type 1 
 tae-r.2   123182417   chlorophyll a-b binding protein of LHCII type 1 
 hvu-r.1   123450709   chlorophyll a-b binding protein of LHCII type 1-like 
 hvu-r.1   123447768   chlorophyll a-b binding protein of LHCII type 1 
 hvu-r.1   123412763   chlorophyll a-b binding protein of LHCII type 1-like 
 sbi-r.1   8082496   chlorophyll a-b binding protein of LHCII type 1 
 sbi-r.1   8077219   chlorophyll a-b binding protein 1, chloroplastic 
 sbi-r.1   8082204   chlorophyll a-b binding protein of LHCII type 1 
 bdi-r.1   104583754   chlorophyll a-b binding protein of LHCII type 1 
 bdi-r.1   100822184   chlorophyll a-b binding protein of LHCII type 1 
 bdi-r.1   100828241   chlorophyll a-b binding protein of LHCII type 1 
 cre-r.1   CHLRE_12g548400v5   uncharacterized protein 
 cre-r.1   CHLRE_04g232104v5   uncharacterized protein 
 cre-r.1   CHLRE_01g066917v5   uncharacterized protein 

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Top 50 coexpressed genes to 125585614 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125585614 (bna-r.1 coexpression data)

CoexMap"125585614"


bnaLOC125585614 | Entrez gene ID : 125585614    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 3 3 2 3 3 2 3 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00196 [list] [network] Photosynthesis - antenna proteins (65 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (68 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (379 genes)  IEA  
GO CC
GO:0010287 [list] [network] plastoglobule  (48 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (300 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
Protein XP_048610959.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_048610959.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_048610959.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125585614
bna-r.1
for
106401200
bna-r.1
for
106349237
bra-r.6
for
103837002
bra-r.6
for
103828916
bra-r.6
for
103828920
ath-u.5
for
LHCB2.3
ath-u.5
for
CAB2
ath-u.5
for
LHB1B1
ghi-r.1
for
107899358
ghi-r.1
for
107955021
ghi-r.1
for
107954948
cit-r.1
for
102610533
cit-r.1
for
102626435
cit-r.1
for
102625299
gma-u.5
for
100793702
gma-u.5
for
100805310
gma-u.5
for
100815789
vvi-u.5
for
100254533
vvi-u.5
for
100245214
ppo-u.5
for
7455996
ppo-u.5
for
7493970
ppo-u.5
for
7493971
mtr-u.5
for
11434875
mtr-u.5
for
25495306
mtr-u.5
for
25495305
sly-u.5
for
101265886
sly-u.5
for
CAB1B
sot-r.1
for
102593779
sot-r.1
for
102594074
sot-r.1
for
102594652
nta-r.1
for
107778264
nta-r.1
for
107776229
nta-r.1
for
107775016
osa-u.5
for
4324599
osa-u.5
for
4346803
osa-u.5
for
4333359
zma-u.5
for
100274453
zma-u.5
for
100281248
zma-u.5
for
100281879
tae-r.2
for
123182882
tae-r.2
for
123182881
tae-r.2
for
123182417
hvu-r.1
for
123450709
hvu-r.1
for
123447768
hvu-r.1
for
123412763
sbi-r.1
for
8082496
sbi-r.1
for
8077219
sbi-r.1
for
8082204
bdi-r.1
for
104583754
bdi-r.1
for
100822184
bdi-r.1
for
100828241
cre-r.1
for
CHLRE_12g548400v5
cre-r.1
for
CHLRE_04g232104v5
cre-r.1
for
CHLRE_01g066917v5


Ortholog ID: 151
Species bna bna bna bra ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC125603606 LOC106432786 LOC106405647 LOC103837002 LHCB2.3 LHB1B1 LOC107954948 LOC107954741 LOC107913771 LOC102610533 LOC102626435 LOC102625299 LHCB1-7 LOC100799813 CAB3 LOC100254533 LOC100252004 LOC100241745 LOC7493970 LOC7493971 LOC7489858 LOC25495306 LOC25495305 LOC25495304 LOC101245729 Cab-3C LOC102594074 LOC102594096 LOC102604320 LOC142169108 LOC107791896 LOC4346803 LOC4333359 LOC4324705 LOC100274453 LOC100281879 LOC103643653 LOC123175700 LOC123060502 LOC123068673 LOC123412763 LOC123412762 LOC123450698 LOC8082496 LOC8082204 LOC8062994 LOC104583754 LOC100828241 LOC100841831 CHLRE_12g548400v5 CHLRE_01g066917v5 CHLRE_12g548950v5
Function* chlorophyll a-b binding protein 1, chloroplastic-like chlorophyll a-b binding protein 1, chloroplastic chlorophyll a-b binding protein 1, chloroplastic chlorophyll a-b binding protein 2.4, chloroplastic photosystem II light harvesting complex protein 2.3 light-harvesting chlorophyll-protein complex II subunit B1 chlorophyll a-b binding protein 151, chloroplastic chlorophyll a-b binding protein 151, chloroplastic-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein 151, chloroplastic chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 photosystem II type I chlorophyll a/b-binding protein chlorophyll a-b binding protein of LHCII type 1 chlorophyll a/b-binding protein chlorophyll a-b binding protein 151, chloroplastic-like chlorophyll a-b binding protein 40, chloroplastic-like chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 5, chloroplastic chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a/b-binding protein chlorophyll a/b-binding protein Cab-3C chlorophyll a-b binding protein 4, chloroplastic chlorophyll a-b binding protein 1C, chloroplastic chlorophyll a-b binding protein 3C, chloroplastic-like chlorophyll a-b binding protein 50, chloroplastic-like chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 1, chloroplastic-like chlorophyll a-b binding protein, chloroplastic-like chlorophyll a-b binding protein 2, chloroplastic-like light harvesting chlorophyll a/b binding protein1 chlorophyll a-b binding protein chlorophyll a-b binding protein, chloroplastic chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein, chloroplastic-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 5, chloroplastic chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 10
bra00195 Photosynthesis 3
bra00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 11
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 13
ath00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 6
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 6
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 12
ghi00195 Photosynthesis 4
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 9
cit00195 Photosynthesis 5
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
cit00860 Porphyrin metabolism 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
cit00195 Photosynthesis 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 14
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 9
vvi00195 Photosynthesis 4
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 9
vvi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 12
ppo00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 9
ppo00860 Porphyrin metabolism 3
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 8
ppo00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 8
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 7
mtr00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 16
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 14
sot00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 11
osa00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 12
osa00195 Photosynthesis 4
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 8
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 18
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 15
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 15
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 11
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 6
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 12
sbi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 10
sbi00195 Photosynthesis 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 10
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 11
cre00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 9
cre00195 Photosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125603606 106432786 106405647 103837002 822391 818006 107954948 107954741 107913771 102610533 102626435 102625299 100800351 100799813 547862 100254533 100252004 100241745 7493970 7493971 7489858 25495306 25495305 25495304 101245729 108491835 102594074 102594096 102604320 142169108 107791896 4346803 4333359 4324705 100274453 100281879 103643653 123175700 123060502 123068673 123412763 123412762 123450698 8082496 8082204 8062994 104583754 100828241 100841831 5719625 5725794 5719633
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