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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g738300v5   uncharacterized protein 
 ath-u.5   AT4G00810   60S acidic ribosomal protein family 
 ath-u.5   AT5G47700   60S acidic ribosomal protein family 
 gma-u.5   100305677   uncharacterized LOC100305677 
 gma-u.5   100791962   60S acidic ribosomal protein P1-3 
 gma-u.5   100801741   60S acidic ribosomal protein P1 
 sly-u.5   101249479   large ribosomal subunit protein P1 
 sly-u.5   104648409   large ribosomal subunit protein P1-like 
 sly-u.5   101259584   large ribosomal subunit protein P1 
 osa-u.5   4344516   large ribosomal subunit protein P1 
 zma-u.5   542719   acidic ribosomal protein P1a 
 zma-u.5   100282819   60S acidic ribosomal protein P1 
 bra-r.6   103843772   60S acidic ribosomal protein P1-3 
 bra-r.6   103858814   60S acidic ribosomal protein P1-2 
 bra-r.6   103836662   60S acidic ribosomal protein P1-1 
 vvi-u.5   100261912   large ribosomal subunit protein P1 
 vvi-u.5   100257825   large ribosomal subunit protein P1 
 vvi-u.5   109124269   large ribosomal subunit protein P1 
 ppo-u.5   18105252   60S acidic ribosomal protein P1 
 ppo-u.5   7478800   60S acidic ribosomal protein P1 
 ppo-u.5   7464480   60S acidic ribosomal protein P1 
 mtr-u.5   11433356   60S acidic ribosomal protein P1-3 
 mtr-u.5   11441480   60S acidic ribosomal protein P1 
 tae-r.2   606341   60S acidic ribosomal protein P1 
 tae-r.2   123164840   60S acidic ribosomal protein P1 
 tae-r.2   123156517   60S acidic ribosomal protein P1 
 hvu-r.1   123407887   60S acidic ribosomal protein P1-like 
 ghi-r.1   107912285   60S acidic ribosomal protein P1 
 ghi-r.1   107890794   60S acidic ribosomal protein P1 
 ghi-r.1   107916651   60S acidic ribosomal protein P1 
 bna-r.1   125596610   60S acidic ribosomal protein P1-1-like 
 bna-r.1   125584308   60S acidic ribosomal protein P1-1 
 bna-r.1   111212473   60S acidic ribosomal protein P1-2 
 sbi-r.1   8068570   60S acidic ribosomal protein P1 
 sot-r.1   102582163   60S acidic ribosomal protein P1-like 
 cit-r.1   102611846   60S acidic ribosomal protein P1 
 cit-r.1   102620783   60S acidic ribosomal protein P1-like 
 bdi-r.1   100839013   60S acidic ribosomal protein P1 
 nta-r.1   107761577   large ribosomal subunit protein P1-like 
 nta-r.1   107767644   large ribosomal subunit protein P1y 

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Top 50 coexpressed genes to CHLRE_17g738300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g738300v5 (cre-r.1 coexpression data)

CoexMap"5725138"


creCHLRE_17g738300v5 | Entrez gene ID : 5725138      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 3 1 2 3 3 3 2 3 1 3 3 1 1 2 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006414 [list] [network] translational elongation  (26 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (35 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (43 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0030295 [list] [network] protein kinase activator activity  (9 genes)  IEA  
GO:0043021 [list] [network] ribonucleoprotein complex binding  (50 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001699629.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto 1,  cysk_nucl 1,  nucl 1,  cysk 1  (predict for XP_001699629.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_001699629.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g738300v5
ath-u.5
for
AT4G00810
ath-u.5
for
AT5G47700
gma-u.5
for
100305677
gma-u.5
for
100791962
gma-u.5
for
100801741
sly-u.5
for
101249479
sly-u.5
for
104648409
sly-u.5
for
101259584
osa-u.5
for
4344516
zma-u.5
for
542719
zma-u.5
for
100282819
bra-r.6
for
103843772
bra-r.6
for
103858814
bra-r.6
for
103836662
vvi-u.5
for
100261912
vvi-u.5
for
100257825
vvi-u.5
for
109124269
ppo-u.5
for
18105252
ppo-u.5
for
7478800
ppo-u.5
for
7464480
mtr-u.5
for
11433356
mtr-u.5
for
11441480
tae-r.2
for
606341
tae-r.2
for
123164840
tae-r.2
for
123156517
hvu-r.1
for
123407887
ghi-r.1
for
107912285
ghi-r.1
for
107890794
ghi-r.1
for
107916651
bna-r.1
for
125596610
bna-r.1
for
125584308
bna-r.1
for
111212473
sbi-r.1
for
8068570
sot-r.1
for
102582163
cit-r.1
for
102611846
cit-r.1
for
102620783
bdi-r.1
for
100839013
nta-r.1
for
107761577
nta-r.1
for
107767644


Ortholog ID: 1212
Species cre ath ath gma gma gma sly sly sly osa zma zma bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot sot cit cit bdi nta nta
Symbol CHLRE_17g738300v5 AT4G00810 AT5G47700 LOC100305677 LOC100791962 LOC100785976 LOC101249479 LOC101259584 LOC101257793 LOC4344516 LOC542719 LOC100282819 LOC103858814 LOC103844623 LOC100261912 LOC100257825 LOC109124269 LOC7478800 LOC7464480 LOC7464304 LOC11433356 LOC11441480 LOC25486934 LOC606341 LOC123164840 LOC123156517 LOC123407887 LOC107912285 LOC107930166 LOC107930453 LOC125595221 LOC106370899 LOC106370896 LOC8068570 LOC102585385 LOC102577551 LOC102611846 LOC102620783 LOC100839013 LOC107802904 LOC107825752
Function* uncharacterized protein 60S acidic ribosomal protein family 60S acidic ribosomal protein family uncharacterized LOC100305677 60S acidic ribosomal protein P1-3 60S acidic ribosomal protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 acidic ribosomal protein P1a 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-2 60S acidic ribosomal protein P1-3 large ribosomal subunit protein P1 large ribosomal subunit protein P1 large ribosomal subunit protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-3 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-like 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-1-like 60S acidic ribosomal protein P1-3-like 60S acidic ribosomal protein P1-3-like 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-like acidic ribosomal protein P1a-like 60S acidic ribosomal protein P1 60S acidic ribosomal protein P1-like 60S acidic ribosomal protein P1 uncharacterized LOC107802904 large ribosomal subunit protein P1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
cre04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5725138 828004 834821 100305677 100791962 100785976 101249479 101259584 101257793 4344516 542719 100282819 103858814 103844623 100261912 100257825 109124269 7478800 7464480 7464304 11433356 11441480 25486934 606341 123164840 123156517 123407887 107912285 107930166 107930453 125595221 106370899 106370896 8068570 102585385 102577551 102611846 102620783 100839013 107802904 107825752
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