ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_17g731250v5	uncharacterized protein
cre-r.1	CHLRE_06g264300v5	uncharacterized protein
ath-u.5	AT1G15810	S15/NS1, RNA-binding protein
ath-u.5	AT1G80620	S15/NS1, RNA-binding protein
gma-u.5	100527419	uncharacterized LOC100527419
gma-u.5	100820600	uncharacterized LOC100820600
sly-u.5	101252508	uncharacterized LOC101252508
zma-u.5	100273039	S15/NS1 RNA-binding protein
zma-u.5	100283625	uncharacterized LOC100283625
bra-r.6	103842880	uncharacterized LOC103842880
bra-r.6	103853231	probable 37S ribosomal protein S28, mitochondrial
bra-r.6	103872379	uncharacterized LOC103872379
vvi-u.5	100267570	uncharacterized LOC100267570
vvi-u.5	100257309	uncharacterized LOC100257309
ppo-u.5	7493208	uncharacterized LOC7493208
mtr-u.5	11420499	uncharacterized LOC11420499
tae-r.2	123139280	uncharacterized LOC123139280
tae-r.2	123128832	uncharacterized LOC123128832
tae-r.2	123145980	protein transport protein sec31
hvu-r.1	123401727	uncharacterized LOC123401727
ghi-r.1	121230805	uncharacterized LOC121230805
ghi-r.1	121218634	uncharacterized LOC121218634
bna-r.1	125604550	probable 37S ribosomal protein S28, mitochondrial
bna-r.1	BNAC06G40390D	uncharacterized BNAC06G40390D
bna-r.1	106413580	uncharacterized LOC106413580
sbi-r.1	8084657	formin-like protein 3
sbi-r.1	8074204	formin-like protein 7
sot-r.1	102602084	lisH domain-containing protein C1711.05-like
cit-r.1	102625381	uncharacterized LOC102625381
bdi-r.1	100838592	protein diaphanous homolog 1
nta-r.1	107780524	uncharacterized LOC107780524

Annotation

functional annotation

KEGG

cre03010 [list] [network] Ribosome (149 genes)

GO BP

GO:0006412 [list] [network] translation

(268 genes)

IEA

GO CC

GO:0005840 [list] [network] ribosome

(168 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(164 genes)

IEA

Protein

XP_042914887.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 2

(predict for XP_042914887.1)

Subcellular
localization
TargetP

mito 3

(predict for XP_042914887.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_17g731250v5	cre-r.1 for CHLRE_06g264300v5	ath-u.5 for AT1G15810	ath-u.5 for AT1G80620	gma-u.5 for 100527419	gma-u.5 for 100820600	sly-u.5 for 101252508	zma-u.5 for 100273039	zma-u.5 for 100283625	bra-r.6 for 103842880	bra-r.6 for 103853231	bra-r.6 for 103872379	vvi-u.5 for 100267570	vvi-u.5 for 100257309	ppo-u.5 for 7493208	mtr-u.5 for 11420499	tae-r.2 for 123139280	tae-r.2 for 123128832	tae-r.2 for 123145980	hvu-r.1 for 123401727	ghi-r.1 for 121230805	ghi-r.1 for 121218634	bna-r.1 for 125604550	bna-r.1 for BNAC06G40390D	bna-r.1 for 106413580	sbi-r.1 for 8084657	sbi-r.1 for 8074204	sot-r.1 for 102602084	cit-r.1 for 102625381	bdi-r.1 for 100838592	nta-r.1 for 107780524

Ortholog

Ortholog ID: 4640

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

S15/NS1, RNA-binding protein

uncharacterized LOC100527419

uncharacterized LOC100820600

uncharacterized LOC101252508

uncharacterized LOC4331046

S15/NS1 RNA-binding protein

uncharacterized LOC100283625

uncharacterized LOC103842880

uncharacterized LOC103872379

probable 37S ribosomal protein S28, mitochondrial

uncharacterized LOC100267570

uncharacterized LOC100257309

uncharacterized LOC7493208

uncharacterized LOC11420499

uncharacterized LOC123139280

uncharacterized LOC123128832

protein transport protein sec31

uncharacterized LOC123401727

uncharacterized LOC121230805

uncharacterized LOC121218634

uncharacterized BNAC06G40390D

uncharacterized LOC106413580

uncharacterized LOC106346809

formin-like protein 3

formin-like protein 7

lisH domain-containing protein C1711.05-like

uncharacterized LOC102625381

protein diaphanous homolog 1

uncharacterized LOC107780524

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	7
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	5
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	3
zma00970	Aminoacyl-tRNA biosynthesis	3
zma00220	Arginine biosynthesis	2
zma00240	Pyrimidine metabolism	2
zma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3
bra00970	Aminoacyl-tRNA biosynthesis	2
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00230	Purine metabolism	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	6
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

Expression

Expression pattern

Entrez Gene ID^*

5727082

5721977

838150

844401

100527419

100820600

101252508

4331046

100273039

100283625

103842880

103872379

103832470

100267570

100257309

7493208

11420499

123139280

123128832

123145980

123401727

121230805

121218634

106430754

106413580

106346809

8084657

8074204

102602084

102625381

100838592

107780524

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_17g731250v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_17g731250v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta	osa
Paralog	2	2	2	1	2	3	2	1	1	3	1	2	3	2	1	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_17g731250v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_17g731250v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**