ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107780524	uncharacterized LOC107780524
sly-u.5	101252508	uncharacterized LOC101252508
sot-r.1	102602084	lisH domain-containing protein C1711.05-like
ath-u.5	AT1G15810	S15/NS1, RNA-binding protein
ath-u.5	AT1G80620	S15/NS1, RNA-binding protein
gma-u.5	100820600	uncharacterized LOC100820600
gma-u.5	100527419	uncharacterized LOC100527419
bra-r.6	103842880	uncharacterized LOC103842880
bra-r.6	103832470	probable 37S ribosomal protein S28, mitochondrial
bra-r.6	103872379	uncharacterized LOC103872379
vvi-u.5	100257309	uncharacterized LOC100257309
vvi-u.5	100267570	uncharacterized LOC100267570
ppo-u.5	7493208	uncharacterized LOC7493208
mtr-u.5	11420499	uncharacterized LOC11420499
ghi-r.1	121230805	uncharacterized LOC121230805
ghi-r.1	121218634	uncharacterized LOC121218634
bna-r.1	125604550	probable 37S ribosomal protein S28, mitochondrial
bna-r.1	106367077	uncharacterized LOC106367077
bna-r.1	BNAC06G40390D	uncharacterized BNAC06G40390D
cit-r.1	102625381	uncharacterized LOC102625381
zma-u.5	100283625	uncharacterized LOC100283625
zma-u.5	100273039	S15/NS1 RNA-binding protein
tae-r.2	123139280	uncharacterized LOC123139280
tae-r.2	123145980	protein transport protein sec31
tae-r.2	123128832	uncharacterized LOC123128832
hvu-r.1	123401727	uncharacterized LOC123401727
sbi-r.1	8074204	formin-like protein 7
sbi-r.1	8084657	formin-like protein 3
bdi-r.1	100838592	protein diaphanous homolog 1
cre-r.1	CHLRE_17g731250v5	uncharacterized protein
cre-r.1	CHLRE_06g264300v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006412 [list] [network] translation

(1013 genes)

IEA

GO CC

GO:0005840 [list] [network] ribosome

(734 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(725 genes)

IEA

Protein

XP_016456564.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 4, mito 1, plas 1, mito_plas 1

(predict for XP_016456564.1)

Subcellular
localization
TargetP

chlo 3

(predict for XP_016456564.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107780524	sly-u.5 for 101252508	sot-r.1 for 102602084	ath-u.5 for AT1G15810	ath-u.5 for AT1G80620	gma-u.5 for 100820600	gma-u.5 for 100527419	bra-r.6 for 103842880	bra-r.6 for 103832470	bra-r.6 for 103872379	vvi-u.5 for 100257309	vvi-u.5 for 100267570	ppo-u.5 for 7493208	mtr-u.5 for 11420499	ghi-r.1 for 121230805	ghi-r.1 for 121218634	bna-r.1 for 125604550	bna-r.1 for 106367077	bna-r.1 for BNAC06G40390D	cit-r.1 for 102625381	zma-u.5 for 100283625	zma-u.5 for 100273039	tae-r.2 for 123139280	tae-r.2 for 123145980	tae-r.2 for 123128832	hvu-r.1 for 123401727	sbi-r.1 for 8074204	sbi-r.1 for 8084657	bdi-r.1 for 100838592	cre-r.1 for CHLRE_17g731250v5	cre-r.1 for CHLRE_06g264300v5

Ortholog

Ortholog ID: 4640

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107780524

uncharacterized LOC101252508

lisH domain-containing protein C1711.05-like

S15/NS1, RNA-binding protein

uncharacterized LOC100820600

uncharacterized LOC100527419

uncharacterized LOC103842880

probable 37S ribosomal protein S28, mitochondrial

uncharacterized LOC103872379

uncharacterized LOC100257309

uncharacterized LOC100267570

uncharacterized LOC7493208

uncharacterized LOC11420499

uncharacterized LOC121230805

uncharacterized LOC121218634

uncharacterized BNAC06G40390D

uncharacterized LOC106413580

uncharacterized LOC106346809

uncharacterized LOC102625381

uncharacterized LOC4331046

uncharacterized LOC100283625

S15/NS1 RNA-binding protein

uncharacterized LOC123139280

protein transport protein sec31

uncharacterized LOC123128832

uncharacterized LOC123401727

formin-like protein 7

formin-like protein 3

protein diaphanous homolog 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	7
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3
bra00970	Aminoacyl-tRNA biosynthesis	2
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00230	Purine metabolism	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	5
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	3
zma00970	Aminoacyl-tRNA biosynthesis	3
zma00220	Arginine biosynthesis	2
zma00240	Pyrimidine metabolism	2
zma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	6
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	10

Expression

Expression pattern

Entrez Gene ID^*

107780524

101252508

102602084

838150

844401

100820600

100527419

103842880

103832470

103872379

100257309

100267570

7493208

11420499

121230805

121218634

106430754

106413580

106346809

102625381

4331046

100283625

100273039

123139280

123145980

123128832

123401727

8074204

8084657

100838592

5727082

5721977

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107780524 (nta-r.1 coexpression data)

Top 50 enrichment test to 107780524 (nta-r.1 coexpression data)


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	zma	tae	hvu	sbi	bdi	cre	osa
Paralog	1	1	1	2	2	3	2	1	1	2	3	1	2	3	1	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107780524 (nta-r.1 coexpression data)

Top 50 enrichment test to 107780524 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**