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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g432800v5   ribosomal protein Sa 
 ath-u.5   P40   40s ribosomal protein SA 
 gma-u.5   548014   ribosome-associated protein p40 
 gma-u.5   100818292   40S ribosomal protein SA 
 gma-u.5   100805318   40S ribosomal protein SA 
 sly-u.5   101250808   40S ribosomal protein SA 
 sly-u.5   101250574   small ribosomal subunit protein uS2 
 osa-u.5   9272225   40S ribosomal protein SA 
 osa-u.5   4343909   40S ribosomal protein Sa-2 
 zma-u.5   100273170   40S ribosomal protein SA-like 
 zma-u.5   103639501   40S ribosomal protein SA-like 
 zma-u.5   100273082   40S ribosomal protein SA-like 
 bra-r.6   103864544   40S ribosomal protein Sa-1 
 bra-r.6   103842262   40S ribosomal protein SA-like 
 bra-r.6   103852778   40S ribosomal protein SA 
 vvi-u.5   100254883   40S ribosomal protein SA 
 ppo-u.5   18103879   40S ribosomal protein Sa-2 
 ppo-u.5   7461949   40S ribosomal protein Sa-2 
 ppo-u.5   7457604   40S ribosomal protein SA 
 mtr-u.5   25499568   40S ribosomal protein SA 
 mtr-u.5   11421256   40S ribosomal protein SA 
 tae-r.2   123052083   40S ribosomal protein Sa-2 
 tae-r.2   123098682   40S ribosomal protein Sa-2 
 tae-r.2   123187941   40S ribosomal protein Sa-2 
 hvu-r.1   123425300   40S ribosomal protein Sa-2-like 
 hvu-r.1   123449626   40S ribosomal protein SA-like 
 ghi-r.1   107913844   40S ribosomal protein SA 
 ghi-r.1   107961834   40S ribosomal protein SA 
 ghi-r.1   107897454   40S ribosomal protein SA 
 bna-r.1   106406427   40S ribosomal protein SA-like 
 bna-r.1   111211475   40S ribosomal protein SA-like 
 bna-r.1   106392144   40S ribosomal protein SA-like 
 sbi-r.1   110432983   40S ribosomal protein Sa-2-like 
 sbi-r.1   110435690   40S ribosomal protein SA-like 
 sbi-r.1   8079191   40S ribosomal protein Sa-2 
 sot-r.1   102601481   40S ribosomal protein SA-like 
 sot-r.1   102601057   40S ribosomal protein SA-like 
 cit-r.1   102626238   40S ribosomal protein Sa-2 
 bdi-r.1   100839630   40S ribosomal protein SA 
 bdi-r.1   100841610   40S ribosomal protein Sa-2 
 bdi-r.1   100821789   40S ribosomal protein Sa-2 
 nta-r.1   107816512   small ribosomal subunit protein uS2 
 nta-r.1   107764229   small ribosomal subunit protein uS2 
 nta-r.1   107776807   small ribosomal subunit protein uS2 

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Top 50 coexpressed genes to CHLRE_10g432800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g432800v5 (cre-r.1 coexpression data)

CoexMap"5728044"


creCHLRE_10g432800v5 | Entrez gene ID : 5728044      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 2 2 3 3 1 3 2 3 2 3 3 3 2 1 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (16 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (35 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (30 genes)  IEA  
GO:0030686 [list] [network] 90S preribosome  (30 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001702485.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_001702485.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001702485.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g432800v5
ath-u.5
for
P40
gma-u.5
for
548014
gma-u.5
for
100818292
gma-u.5
for
100805318
sly-u.5
for
101250808
sly-u.5
for
101250574
osa-u.5
for
9272225
osa-u.5
for
4343909
zma-u.5
for
100273170
zma-u.5
for
103639501
zma-u.5
for
100273082
bra-r.6
for
103864544
bra-r.6
for
103842262
bra-r.6
for
103852778
vvi-u.5
for
100254883
ppo-u.5
for
18103879
ppo-u.5
for
7461949
ppo-u.5
for
7457604
mtr-u.5
for
25499568
mtr-u.5
for
11421256
tae-r.2
for
123052083
tae-r.2
for
123098682
tae-r.2
for
123187941
hvu-r.1
for
123425300
hvu-r.1
for
123449626
ghi-r.1
for
107913844
ghi-r.1
for
107961834
ghi-r.1
for
107897454
bna-r.1
for
106406427
bna-r.1
for
111211475
bna-r.1
for
106392144
sbi-r.1
for
110432983
sbi-r.1
for
110435690
sbi-r.1
for
8079191
sot-r.1
for
102601481
sot-r.1
for
102601057
cit-r.1
for
102626238
bdi-r.1
for
100839630
bdi-r.1
for
100841610
bdi-r.1
for
100821789
nta-r.1
for
107816512
nta-r.1
for
107764229
nta-r.1
for
107776807


Ortholog ID: 2185
Species cre ath gma gma gma sly sly osa osa zma zma zma bra bra bra vvi ppo ppo ppo mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot cit bdi bdi bdi nta nta nta
Symbol CHLRE_10g432800v5 P40 LOC548014 LOC100818292 LOC100786575 LOC101250808 LOC101250574 LOC9272225 LOC4343909 LOC100273170 LOC100282918 LOC100283431 LOC103842262 LOC103831746 LOC103830793 LOC100254883 LOC18103879 LOC7461949 LOC7457604 LOC25499568 LOC11421256 LOC123052083 LOC123098682 LOC123044207 LOC123425300 LOC123449626 LOC107913844 LOC107897454 LOC107899853 LOC106406427 LOC106354211 LOC106433052 LOC110432983 LOC110435690 LOC8079191 LOC102601481 LOC102601057 LOC102626238 LOC100841610 LOC100821789 LOC100832279 LOC107816512 LOC107764229 LOC107776807
Function* ribosomal protein Sa 40s ribosomal protein SA ribosome-associated protein p40 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA small ribosomal subunit protein uS2 40S ribosomal protein SA 40S ribosomal protein Sa-2 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2-like 40S ribosomal protein SA-like 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA-like 40S ribosomal protein SA 40S ribosomal protein SA-like 40S ribosomal protein Sa-2-like 40S ribosomal protein SA-like 40S ribosomal protein Sa-2 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2 40S ribosomal protein SA small ribosomal subunit protein uS2 small ribosomal subunit protein uS2 small ribosomal subunit protein uS2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre01230 Biosynthesis of amino acids 4
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00940 Phenylpropanoid biosynthesis 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi00230 Purine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta01230 Biosynthesis of amino acids 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta01230 Biosynthesis of amino acids 3
nta00300 Lysine biosynthesis 2
nta00470 D-Amino acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728044 843569 548014 100818292 100786575 101250808 101250574 9272225 4343909 100273170 100282918 100283431 103842262 103831746 103830793 100254883 18103879 7461949 7457604 25499568 11421256 123052083 123098682 123044207 123425300 123449626 107913844 107897454 107899853 106406427 106354211 106433052 110432983 110435690 8079191 102601481 102601057 102626238 100841610 100821789 100832279 107816512 107764229 107776807
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