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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   548014   ribosome-associated protein p40 
 gma-r.7   548014   ribosome-associated protein p40 
 gma-m.5   548014   ribosome-associated protein p40 
 gma-u.5   100805318   40S ribosomal protein SA 
 gma-u.5   100818292   40S ribosomal protein SA 
 gma-u.5   100786575   40S ribosomal protein SA 
 mtr-u.5   11421256   40S ribosomal protein SA 
 mtr-u.5   25499568   40S ribosomal protein SA 
 ppo-u.5   7457604   40S ribosomal protein SA 
 ppo-u.5   7461949   40S ribosomal protein Sa-2 
 ppo-u.5   18094685   40S ribosomal protein SA 
 ath-u.5   P40   40s ribosomal protein SA 
 vvi-u.5   100254883   40S ribosomal protein SA 
 sly-u.5   101250808   40S ribosomal protein SA 
 sly-u.5   101250574   small ribosomal subunit protein uS2 
 osa-u.5   9272225   40S ribosomal protein SA 
 osa-u.5   4343909   40S ribosomal protein Sa-2 
 zma-u.5   100283431   40S ribosomal protein SA-like 
 zma-u.5   103639501   40S ribosomal protein SA-like 
 zma-u.5   100282918   40S ribosomal protein SA-like 

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Top 50 coexpressed genes to 548014 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 548014 (gma-u.5 coexpression data)

CoexMap"548014"


gmaLOC548014 | Entrez gene ID : 548014    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 3 1 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (43 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (114 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (71 genes)  IEA  
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (138 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein NP_001237424.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  mito 1,  cysk_nucl 1  (predict for NP_001237424.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001237424.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
548014

.
gma-r.7
for
548014

.
gma-m.5
for
548014

.
gma-u.5
for
100805318

.
gma-u.5
for
100818292

.
gma-u.5
for
100786575

.
mtr-u.5
for
11421256

.
mtr-u.5
for
25499568

.
ppo-u.5
for
7457604

.
ppo-u.5
for
7461949

.
ppo-u.5
for
18094685

.
ath-u.5
for
P40

.
vvi-u.5
for
100254883

.
sly-u.5
for
101250808

.
sly-u.5
for
101250574

.
osa-u.5
for
9272225

.
osa-u.5
for
4343909

.
zma-u.5
for
100283431

.
zma-u.5
for
103639501

.
zma-u.5
for
100282918

.


Ortholog ID: 2185
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol P40 LOC100818292 LOC100786575 LOC101250574 LOC101250808 LOC4343909 LOC9272225 LOC100273170 LOC100282918 LOC103830793 LOC103831746 LOC100254883 LOC7461949 LOC7457604 LOC11421256 LOC25499568 LOC123052083 LOC123098682 LOC123425300 LOC123449626 LOC107897454 LOC107913844 LOC106406427 LOC106433052 CHLRE_10g432800v5 LOC8079191 LOC110435690 LOC102601481 LOC102601057 LOC102626238 LOC100832279 LOC100821789 LOC107764229 LOC107776807
Function* 40s ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA small ribosomal subunit protein uS2 40S ribosomal protein SA 40S ribosomal protein Sa-2 40S ribosomal protein SA 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein Sa-2 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2-like 40S ribosomal protein SA-like 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA-like 40S ribosomal protein SA-like ribosomal protein Sa 40S ribosomal protein Sa-2 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein Sa-2 40S ribosomal protein SA 40S ribosomal protein Sa-2 small ribosomal subunit protein uS2 small ribosomal subunit protein uS2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre01230 Biosynthesis of amino acids 4
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi00230 Purine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta01230 Biosynthesis of amino acids 3
nta00300 Lysine biosynthesis 2
nta00470 D-Amino acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843569 100818292 100786575 101250574 101250808 4343909 9272225 100273170 100282918 103830793 103831746 100254883 7461949 7457604 11421256 25499568 123052083 123098682 123425300 123449626 107897454 107913844 106406427 106433052 5728044 8079191 110435690 102601481 102601057 102626238 100832279 100821789 107764229 107776807
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