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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107899853   40S ribosomal protein SA 
 ath-u.5   P40   40s ribosomal protein SA 
 gma-u.5   548014   ribosome-associated protein p40 
 gma-u.5   100805318   40S ribosomal protein SA 
 gma-u.5   100786575   40S ribosomal protein SA 
 vvi-u.5   100254883   40S ribosomal protein SA 
 ppo-u.5   7457604   40S ribosomal protein SA 
 ppo-u.5   7461949   40S ribosomal protein Sa-2 
 ppo-u.5   18094685   40S ribosomal protein SA 
 mtr-u.5   11421256   40S ribosomal protein SA 
 mtr-u.5   25499568   40S ribosomal protein SA 
 sly-u.5   101250808   40S ribosomal protein SA 
 sly-u.5   101250574   small ribosomal subunit protein uS2 
 osa-u.5   9272225   40S ribosomal protein SA 
 osa-u.5   4343909   40S ribosomal protein Sa-2 
 zma-u.5   100283431   40S ribosomal protein SA-like 
 zma-u.5   103639501   40S ribosomal protein SA-like 
 zma-u.5   100282918   40S ribosomal protein SA-like 

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Top 50 coexpressed genes to 107899853 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107899853 (ghi-r.1 coexpression data)

CoexMap"107899853"


ghiLOC107899853 | Entrez gene ID : 107899853    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 3 1 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (100 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (214 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (82 genes)  IEA  
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_040951461.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  mito 1,  cysk_nucl 1  (predict for XP_040951461.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040951461.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107899853
ath-u.5
for
P40
gma-u.5
for
548014
gma-u.5
for
100805318
gma-u.5
for
100786575
vvi-u.5
for
100254883
ppo-u.5
for
7457604
ppo-u.5
for
7461949
ppo-u.5
for
18094685
mtr-u.5
for
11421256
mtr-u.5
for
25499568
sly-u.5
for
101250808
sly-u.5
for
101250574
osa-u.5
for
9272225
osa-u.5
for
4343909
zma-u.5
for
100283431
zma-u.5
for
103639501
zma-u.5
for
100282918


Ortholog ID: 2185
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107897454 LOC107913844 P40 LOC103830793 LOC103831746 LOC106406427 LOC106433052 LOC102626238 LOC100818292 LOC100786575 LOC100254883 LOC7461949 LOC7457604 LOC11421256 LOC25499568 LOC101250574 LOC101250808 LOC102601481 LOC102601057 LOC107764229 LOC107776807 LOC4343909 LOC9272225 LOC100273170 LOC100282918 LOC123052083 LOC123098682 LOC123425300 LOC123449626 LOC8079191 LOC110435690 LOC100832279 LOC100821789 CHLRE_10g432800v5
Function* 40S ribosomal protein SA 40S ribosomal protein SA 40s ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein Sa-2 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein Sa-2 40S ribosomal protein SA 40S ribosomal protein SA 40S ribosomal protein SA small ribosomal subunit protein uS2 40S ribosomal protein SA 40S ribosomal protein SA-like 40S ribosomal protein SA-like small ribosomal subunit protein uS2 small ribosomal subunit protein uS2 40S ribosomal protein Sa-2 40S ribosomal protein SA 40S ribosomal protein SA-like 40S ribosomal protein SA-like 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2 40S ribosomal protein Sa-2-like 40S ribosomal protein SA-like 40S ribosomal protein Sa-2 40S ribosomal protein SA-like 40S ribosomal protein SA 40S ribosomal protein Sa-2 ribosomal protein Sa
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta01230 Biosynthesis of amino acids 3
nta00300 Lysine biosynthesis 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi00230 Purine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre01230 Biosynthesis of amino acids 4
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897454 107913844 843569 103830793 103831746 106406427 106433052 102626238 100818292 100786575 100254883 7461949 7457604 11421256 25499568 101250574 101250808 102601481 102601057 107764229 107776807 4343909 9272225 100273170 100282918 123052083 123098682 123425300 123449626 8079191 110435690 100832279 100821789 5728044
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