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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g431400v5   uncharacterized protein 
 ath-u.5   CPZ   Metallo-hydrolase/oxidoreductase superfamily protein 
 ath-u.5   TRZ1   tRNAse Z1 
 gma-u.5   100807082   ribonuclease Z, chloroplastic-like 
 gma-u.5   100808196   tRNase Z TRZ2, chloroplastic 
 gma-u.5   100809325   tRNase Z TRZ1 
 sly-u.5   101247202   nuclear ribonuclease Z 
 sly-u.5   101268762   tRNase Z TRZ2, chloroplastic 
 osa-u.5   9269203   tRNase Z TRZ2, chloroplastic 
 osa-u.5   4328713   nuclear ribonuclease Z 
 zma-u.5   100285786   uncharacterized LOC100285786 
 zma-u.5   100217092   nuclear ribonuclease Z 
 bra-r.6   103852919   tRNase Z TRZ1 
 bra-r.6   103860305   tRNase Z TRZ2, chloroplastic 
 vvi-u.5   100267142   tRNase Z TRZ2, chloroplastic 
 vvi-u.5   100262176   tRNase Z TRZ1 
 ppo-u.5   18105812   tRNase Z TRZ1 
 ppo-u.5   7455968   tRNase Z TRZ2, chloroplastic 
 mtr-u.5   25482620   tRNase Z TRZ1 
 mtr-u.5   11431230   tRNase Z TRZ2, chloroplastic 
 mtr-u.5   11433053   tRNase Z TRZ1 
 tae-r.2   123144375   nuclear ribonuclease Z 
 tae-r.2   123121887   tRNase Z TRZ2, chloroplastic 
 tae-r.2   123104135   tRNase Z TRZ2, chloroplastic 
 hvu-r.1   123399303   tRNase Z TRZ2, chloroplastic-like 
 hvu-r.1   123403421   nuclear ribonuclease Z 
 ghi-r.1   107949840   tRNase Z TRZ1 
 ghi-r.1   107886126   tRNase Z TRZ1 
 ghi-r.1   121219392   tRNase Z TRZ2, chloroplastic 
 bna-r.1   106361828   tRNase Z TRZ2, chloroplastic 
 bna-r.1   111210602   tRNase Z TRZ2, chloroplastic 
 bna-r.1   111202928   tRNase Z TRZ1-like 
 sbi-r.1   8082950   tRNase Z TRZ1 
 sbi-r.1   8078362   nuclear ribonuclease Z 
 sbi-r.1   8055856   tRNase Z TRZ2, chloroplastic 
 sot-r.1   102579294   ribonuclease Z, chloroplastic 
 sot-r.1   102582365   nuclear ribonuclease Z-like 
 sot-r.1   102601375   nuclear ribonuclease Z-like 
 cit-r.1   102629813   tRNase Z TRZ2, chloroplastic 
 cit-r.1   102629669   tRNase Z TRZ1 
 bdi-r.1   100834210   nuclear ribonuclease Z 
 bdi-r.1   100845341   tRNase Z TRZ2, chloroplastic 
 nta-r.1   107790503   nuclear ribonuclease Z 
 nta-r.1   107794504   tRNase Z TRZ2, chloroplastic 
 nta-r.1   107806154   nuclear ribonuclease Z 

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Top 50 coexpressed genes to CHLRE_10g431400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g431400v5 (cre-r.1 coexpression data)

CoexMap"5728072"


creCHLRE_10g431400v5 | Entrez gene ID : 5728072      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 2 2 2 2 2 2 3 3 2 3 3 3 3 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_001702499.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1  (predict for XP_001702499.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001702499.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g431400v5
ath-u.5
for
CPZ
ath-u.5
for
TRZ1
gma-u.5
for
100807082
gma-u.5
for
100808196
gma-u.5
for
100809325
sly-u.5
for
101247202
sly-u.5
for
101268762
osa-u.5
for
9269203
osa-u.5
for
4328713
zma-u.5
for
100285786
zma-u.5
for
100217092
bra-r.6
for
103852919
bra-r.6
for
103860305
vvi-u.5
for
100267142
vvi-u.5
for
100262176
ppo-u.5
for
18105812
ppo-u.5
for
7455968
mtr-u.5
for
25482620
mtr-u.5
for
11431230
mtr-u.5
for
11433053
tae-r.2
for
123144375
tae-r.2
for
123121887
tae-r.2
for
123104135
hvu-r.1
for
123399303
hvu-r.1
for
123403421
ghi-r.1
for
107949840
ghi-r.1
for
107886126
ghi-r.1
for
121219392
bna-r.1
for
106361828
bna-r.1
for
111210602
bna-r.1
for
111202928
sbi-r.1
for
8082950
sbi-r.1
for
8078362
sbi-r.1
for
8055856
sot-r.1
for
102579294
sot-r.1
for
102582365
sot-r.1
for
102601375
cit-r.1
for
102629813
cit-r.1
for
102629669
bdi-r.1
for
100834210
bdi-r.1
for
100845341
nta-r.1
for
107790503
nta-r.1
for
107794504
nta-r.1
for
107806154


Ortholog ID: 2972
Species cre ath ath gma gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_10g431400v5 CPZ TRZ1 LOC100807082 LOC100808196 LOC100809325 LOC101247202 LOC101268762 LOC9269203 LOC4328713 LOC100285786 LOC100217092 LOC103852919 LOC103860305 LOC100267142 LOC100262176 LOC18105812 LOC7455968 LOC25482620 LOC11431230 LOC11433053 LOC123104135 LOC123112362 LOC123127313 LOC123399303 LOC123403421 LOC107949840 LOC107886126 LOC121219392 LOC111210602 LOC111202928 LOC106379480 LOC8082950 LOC8078362 LOC8055856 LOC102579294 LOC102582365 LOC102601375 LOC102629813 LOC102629669 LOC100834210 LOC100845341 LOC107794504 LOC107768906 LOC107811357
Function* uncharacterized protein Metallo-hydrolase/oxidoreductase superfamily protein tRNAse Z1 ribonuclease Z, chloroplastic-like tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 nuclear ribonuclease Z tRNase Z TRZ2, chloroplastic tRNase Z TRZ2, chloroplastic nuclear ribonuclease Z uncharacterized LOC100285786 nuclear ribonuclease Z tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ2, chloroplastic nuclear ribonuclease Z-like tRNase Z TRZ2, chloroplastic-like nuclear ribonuclease Z tRNase Z TRZ1 tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ2, chloroplastic tRNase Z TRZ1-like tRNase Z TRZ1 tRNase Z TRZ1 nuclear ribonuclease Z tRNase Z TRZ2, chloroplastic ribonuclease Z, chloroplastic nuclear ribonuclease Z-like nuclear ribonuclease Z-like tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 nuclear ribonuclease Z tRNase Z TRZ2, chloroplastic tRNase Z TRZ2, chloroplastic nuclear ribonuclease Z-like nuclear ribonuclease Z-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra01240 Biosynthesis of cofactors 3
bra00290 Valine, leucine and isoleucine biosynthesis 3
bra00770 Pantothenate and CoA biosynthesis 3
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00240 Pyrimidine metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
cit04145 Phagosome 3
cit03060 Protein export 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728072 814995 843809 100807082 100808196 100809325 101247202 101268762 9269203 4328713 100285786 100217092 103852919 103860305 100267142 100262176 18105812 7455968 25482620 11431230 11433053 123104135 123112362 123127313 123399303 123403421 107949840 107886126 121219392 111210602 111202928 106379480 8082950 8078362 8055856 102579294 102582365 102601375 102629813 102629669 100834210 100845341 107794504 107768906 107811357
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