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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100808196   tRNase Z TRZ2, chloroplastic 
 gma-r.7   100808196   tRNase Z TRZ2, chloroplastic 
 gma-m.5   100808196   tRNase Z TRZ2, chloroplastic 
 gma-u.5   100807082   ribonuclease Z, chloroplastic-like 
 gma-u.5   100809325   tRNase Z TRZ1 
 mtr-u.5   11433053   tRNase Z TRZ1 
 mtr-u.5   25482620   tRNase Z TRZ1 
 mtr-u.5   11431230   tRNase Z TRZ2, chloroplastic 
 ppo-u.5   18105812   tRNase Z TRZ1 
 ppo-u.5   7455968   tRNase Z TRZ2, chloroplastic 
 ath-u.5   CPZ   Metallo-hydrolase/oxidoreductase superfamily protein 
 ath-u.5   TRZ1   tRNAse Z1 
 vvi-u.5   100262176   tRNase Z TRZ1 
 vvi-u.5   100267142   tRNase Z TRZ2, chloroplastic 
 sly-u.5   101247202   nuclear ribonuclease Z 
 sly-u.5   101268762   tRNase Z TRZ2, chloroplastic 
 osa-u.5   4328713   nuclear ribonuclease Z 
 osa-u.5   9269203   tRNase Z TRZ2, chloroplastic 
 zma-u.5   100285786   uncharacterized LOC100285786 
 zma-u.5   100217092   nuclear ribonuclease Z 

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Top 50 coexpressed genes to 100808196 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100808196 (gma-u.5 coexpression data)

CoexMap"100808196"


gmaLOC100808196 | Entrez gene ID : 100808196      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 2 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_003519435.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 2,  nucl 2,  mito_plas 2,  cyto 1  (predict for XP_003519435.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_003519435.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100808196
gma-r.7
for
100808196
gma-m.5
for
100808196
gma-u.5
for
100807082
gma-u.5
for
100809325
mtr-u.5
for
11433053
mtr-u.5
for
25482620
mtr-u.5
for
11431230
ppo-u.5
for
18105812
ppo-u.5
for
7455968
ath-u.5
for
CPZ
ath-u.5
for
TRZ1
vvi-u.5
for
100262176
vvi-u.5
for
100267142
sly-u.5
for
101247202
sly-u.5
for
101268762
osa-u.5
for
4328713
osa-u.5
for
9269203
zma-u.5
for
100285786
zma-u.5
for
100217092


Ortholog ID: 2972
Species gma gma mtr mtr ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100808196 LOC100809325 LOC11431230 LOC11433053 LOC18105812 LOC7455968 TRZ1 CPZ LOC103860305 LOC103852919 LOC100262176 LOC100267142 LOC107949840 LOC107886126 LOC111210602 LOC111202928 LOC102629669 LOC102629813 LOC101268762 LOC101247202 LOC102582365 LOC102579294 LOC107811357 LOC107794504 LOC4328713 LOC9269203 LOC100217092 LOC100285786 LOC123127313 LOC123104135 LOC123399303 LOC123403421 LOC8082950 LOC8078362 LOC100845341 LOC100834210 CHLRE_10g431400v5
Function* tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNAse Z1 Metallo-hydrolase/oxidoreductase superfamily protein tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ1 tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ1-like tRNase Z TRZ1 tRNase Z TRZ2, chloroplastic tRNase Z TRZ2, chloroplastic nuclear ribonuclease Z nuclear ribonuclease Z-like ribonuclease Z, chloroplastic nuclear ribonuclease Z-like tRNase Z TRZ2, chloroplastic nuclear ribonuclease Z tRNase Z TRZ2, chloroplastic nuclear ribonuclease Z uncharacterized LOC100285786 nuclear ribonuclease Z-like tRNase Z TRZ2, chloroplastic tRNase Z TRZ2, chloroplastic-like nuclear ribonuclease Z tRNase Z TRZ1 nuclear ribonuclease Z tRNase Z TRZ2, chloroplastic nuclear ribonuclease Z uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra01240 Biosynthesis of cofactors 3
bra00290 Valine, leucine and isoleucine biosynthesis 3
bra00770 Pantothenate and CoA biosynthesis 3
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
cit04145 Phagosome 3
cit03060 Protein export 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00240 Pyrimidine metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808196 100809325 11431230 11433053 18105812 7455968 843809 814995 103860305 103852919 100262176 100267142 107949840 107886126 111210602 111202928 102629669 102629813 101268762 101247202 102582365 102579294 107811357 107794504 4328713 9269203 100217092 100285786 123127313 123104135 123399303 123403421 8082950 8078362 100845341 100834210 5728072
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