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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g429880v5   uncharacterized protein 
 ath-u.5   AT3G43240   ARID/BRIGHT DNA-binding domain-containing protein 
 gma-u.5   100775894   AT-rich interactive domain-containing protein 4 
 gma-u.5   100808357   AT-rich interactive domain-containing protein 4 
 gma-u.5   100816540   AT-rich interactive domain-containing protein 4 
 sly-u.5   101260515   AT-rich interactive domain-containing protein 4 
 osa-u.5   4347140   AT-rich interactive domain-containing protein 4 
 osa-u.5   4345731   AT-rich interactive domain-containing protein 4 
 osa-u.5   4345729   AT-rich interactive domain-containing protein 4 
 zma-u.5   103647451   AT-rich interactive domain-containing protein 4 
 zma-u.5   100279908   uncharacterized LOC100279908 
 zma-u.5   100191457   uncharacterized LOC100191457 
 bra-r.6   103848026   AT-rich interactive domain-containing protein 4 
 vvi-u.5   100251584   AT-rich interactive domain-containing protein 4 
 vvi-u.5   100262830   AT-rich interactive domain-containing protein 4 
 ppo-u.5   7490525   AT-rich interactive domain-containing protein 4 
 ppo-u.5   18100272   AT-rich interactive domain-containing protein 4 
 mtr-u.5   11443291   AT-rich interactive domain-containing protein 4 
 mtr-u.5   11445678   AT-rich interactive domain-containing protein 4 
 mtr-u.5   11446975   AT-rich interactive domain-containing protein 4 
 tae-r.2   123121567   AT-rich interactive domain-containing protein 4 
 tae-r.2   123112017   AT-rich interactive domain-containing protein 4 
 tae-r.2   123103791   AT-rich interactive domain-containing protein 4 
 hvu-r.1   123397685   AT-rich interactive domain-containing protein 4 
 ghi-r.1   107900987   AT-rich interactive domain-containing protein 4 
 ghi-r.1   107942371   AT-rich interactive domain-containing protein 4 
 ghi-r.1   107958819   AT-rich interactive domain-containing protein 4 
 bna-r.1   111198785   AT-rich interactive domain-containing protein 4 
 sbi-r.1   110432681   AT-rich interactive domain-containing protein 4-like 
 sbi-r.1   8077881   AT-rich interactive domain-containing protein 4 
 sot-r.1   102586778   AT-rich interactive domain-containing protein 4 
 cit-r.1   102611670   AT-rich interactive domain-containing protein 4 
 bdi-r.1   100824739   AT-rich interactive domain-containing protein 4 
 bdi-r.1   100844696   AT-rich interactive domain-containing protein 4 
 bdi-r.1   100821621   AT-rich interactive domain-containing protein 4 
 nta-r.1   107763227   AT-rich interactive domain-containing protein 4 
 nta-r.1   107799264   AT-rich interactive domain-containing protein 4-like 

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Top 50 coexpressed genes to CHLRE_10g429880v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g429880v5 (cre-r.1 coexpression data)

CoexMap"5728104"


creCHLRE_10g429880v5 | Entrez gene ID : 5728104    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 3 3 1 2 2 3 3 1 3 1 2 1 1 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_001702690.2 [sequence] [blastp]
XP_042920022.1 [sequence] [blastp]
XP_042920023.1 [sequence] [blastp]
XP_042920024.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_001702690.2)
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_042920022.1)
chlo 4,  cyto 3,  mito 2  (predict for XP_042920023.1)
nucl 4,  cyto 2,  mito 2,  nucl_plas 2  (predict for XP_042920024.1)
Subcellular
localization
TargetP
other 3  (predict for XP_001702690.2)
other 2  (predict for XP_042920022.1)
other 3  (predict for XP_042920023.1)
other 7  (predict for XP_042920024.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g429880v5
ath-u.5
for
AT3G43240
gma-u.5
for
100775894
gma-u.5
for
100808357
gma-u.5
for
100816540
sly-u.5
for
101260515
osa-u.5
for
4347140
osa-u.5
for
4345731
osa-u.5
for
4345729
zma-u.5
for
103647451
zma-u.5
for
100279908
zma-u.5
for
100191457
bra-r.6
for
103848026
vvi-u.5
for
100251584
vvi-u.5
for
100262830
ppo-u.5
for
7490525
ppo-u.5
for
18100272
mtr-u.5
for
11443291
mtr-u.5
for
11445678
mtr-u.5
for
11446975
tae-r.2
for
123121567
tae-r.2
for
123112017
tae-r.2
for
123103791
hvu-r.1
for
123397685
ghi-r.1
for
107900987
ghi-r.1
for
107942371
ghi-r.1
for
107958819
bna-r.1
for
111198785
sbi-r.1
for
110432681
sbi-r.1
for
8077881
sot-r.1
for
102586778
cit-r.1
for
102611670
bdi-r.1
for
100824739
bdi-r.1
for
100844696
bdi-r.1
for
100821621
nta-r.1
for
107763227
nta-r.1
for
107799264


Ortholog ID: 4396
Species cre ath gma gma gma sly osa osa osa zma zma zma bra vvi vvi ppo ppo mtr mtr mtr tae tae tae hvu ghi ghi ghi bna sbi sbi sot cit bdi bdi bdi nta nta
Symbol CHLRE_10g429880v5 AT3G43240 LOC100808357 LOC100816540 LOC100820590 LOC101260515 LOC4347140 LOC4345728 LOC4345378 LOC103647451 LOC100279908 LOC100191457 LOC103848026 LOC100251584 LOC100262830 LOC7490525 LOC18100272 LOC11443291 LOC11445678 LOC11446975 LOC123121567 LOC123112017 LOC123103791 LOC123397685 LOC107900987 LOC107958819 LOC107961641 LOC111198785 LOC110432681 LOC8077881 LOC102586778 LOC102611670 LOC100824739 LOC100844696 LOC100821621 LOC107763227 LOC107799264
Function* uncharacterized protein ARID/BRIGHT DNA-binding domain-containing protein AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 uncharacterized LOC100279908 uncharacterized LOC100191457 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4-like AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00020 Citrate cycle (TCA cycle) 3
cre00640 Propanoate metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath05100 Bacterial invasion of epithelial cells 3
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 3
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi04148 Efferocytosis 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 6
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728104 823399 100808357 100816540 100820590 101260515 4347140 4345728 4345378 103647451 100279908 100191457 103848026 100251584 100262830 7490525 18100272 11443291 11445678 11446975 123121567 123112017 123103791 123397685 107900987 107958819 107961641 111198785 110432681 8077881 102586778 102611670 100824739 100844696 100821621 107763227 107799264
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