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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_04g213761v5   uncharacterized protein 
 ath-u.5   AT1G35250   Thioesterase superfamily protein 
 ath-u.5   AT1G68260   Thioesterase superfamily protein 
 gma-u.5   MKS2   methylketone synthase 2 
 sly-u.5   MKS2b   methylketone synthase IIb 
 sly-u.5   MKS2   methylketone synthase IIa 
 osa-u.5   4336608   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 zma-u.5   100502341   Acyl-acyl carrier protein thioesterase ATL3 chloroplastic 
 bra-r.6   103831241   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 vvi-u.5   100268132   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 vvi-u.5   100250950   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 ppo-u.5   7466892   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 mtr-u.5   11406694   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 tae-r.2   123046390   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 tae-r.2   123054240   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 hvu-r.1   123427557   acyl-acyl carrier protein thioesterase TE3, chloroplastic-like 
 ghi-r.1   121228183   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 ghi-r.1   107899614   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 ghi-r.1   121228182   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 sot-r.1   102593733   uncharacterized LOC102593733 
 sot-r.1   102595992   uncharacterized LOC102595992 
 cit-r.1   102621919   hypothetical protein 
 bdi-r.1   100838144   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 bdi-r.1   100824047   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 nta-r.1   107801358   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 nta-r.1   107827593   acyl-acyl carrier protein thioesterase TE3, chloroplastic 

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Top 50 coexpressed genes to CHLRE_04g213761v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g213761v5 (cre-r.1 coexpression data)

CoexMap"5728656"


creCHLRE_04g213761v5 | Entrez gene ID : 5728656      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi sot cit bdi nta sbi bna
Paralog 1 2 1 2 1 1 1 2 1 1 2 1 3 2 1 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (224 genes)  IEA  
GO MF
GO:0016297 [list] [network] fatty acyl-[ACP] hydrolase activity  (2 genes)  IEA  
Protein XP_042924949.1 [sequence] [blastp]
XP_042924950.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_042924949.1)
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_042924950.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_042924949.1)
mito 8  (predict for XP_042924950.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_04g213761v5
ath-u.5
for
AT1G35250
ath-u.5
for
AT1G68260
gma-u.5
for
MKS2
sly-u.5
for
MKS2b
sly-u.5
for
MKS2
osa-u.5
for
4336608
zma-u.5
for
100502341
bra-r.6
for
103831241
vvi-u.5
for
100268132
vvi-u.5
for
100250950
ppo-u.5
for
7466892
mtr-u.5
for
11406694
tae-r.2
for
123046390
tae-r.2
for
123054240
hvu-r.1
for
123427557
ghi-r.1
for
121228183
ghi-r.1
for
107899614
ghi-r.1
for
121228182
sot-r.1
for
102593733
sot-r.1
for
102595992
cit-r.1
for
102621919
bdi-r.1
for
100838144
bdi-r.1
for
100824047
nta-r.1
for
107801358
nta-r.1
for
107827593


Ortholog ID: 3282
Species cre ath ath gma sly sly osa zma bra vvi vvi ppo mtr hvu ghi ghi ghi sbi sot sot cit bdi bdi nta nta
Symbol CHLRE_04g213761v5 AT1G35250 AT1G68260 MKS2 MKS2b MKS2 LOC4336608 LOC100502341 LOC103831241 LOC100268132 LOC100250950 LOC7466892 LOC11406694 LOC123427557 LOC121228183 LOC107899614 LOC121228182 LOC8055968 LOC102593733 LOC102595992 LOC102621919 LOC100838144 LOC100824047 LOC107801358 LOC107827593
Function* uncharacterized protein Thioesterase superfamily protein Thioesterase superfamily protein methylketone synthase 2 methylketone synthase IIb methylketone synthase IIa acyl-acyl carrier protein thioesterase TE3, chloroplastic Acyl-acyl carrier protein thioesterase ATL3 chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic-like acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic uncharacterized LOC102593733 uncharacterized LOC102595992 hypothetical protein acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00220 Arginine biosynthesis 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 5
gma01200 Carbon metabolism 5
gma00061 Fatty acid biosynthesis 5
gma01212 Fatty acid metabolism 5
gma01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly00010 Glycolysis / Gluconeogenesis 2
sly00053 Ascorbate and aldarate metabolism 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra04141 Protein processing in endoplasmic reticulum 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 4
vvi04075 Plant hormone signal transduction 3
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00860 Porphyrin metabolism 3
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 8
mtr01212 Fatty acid metabolism 8
mtr00620 Pyruvate metabolism 7
mtr01200 Carbon metabolism 7
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi00780 Biotin metabolism 4
ghi01212 Fatty acid metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi00780 Biotin metabolism 6
ghi01212 Fatty acid metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi00780 Biotin metabolism 6
ghi01212 Fatty acid metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 3
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi03018 RNA degradation 2
sbi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00061 Fatty acid biosynthesis 3
sot01212 Fatty acid metabolism 3
sot03040 Spliceosome 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00190 Oxidative phosphorylation 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta04144 Endocytosis 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728656 840414 843155 100806931 101260040 100191124 4336608 100502341 103831241 100268132 100250950 7466892 11406694 123427557 121228183 107899614 121228182 8055968 102593733 102595992 102621919 100838144 100824047 107801358 107827593
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