ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_01g039626v5	uncharacterized protein
cre-r.1	CHLRE_17g739050v5	uncharacterized protein
ath-u.5	AT4G11270	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100818675	uncharacterized LOC100818675
gma-u.5	100816646	uncharacterized LOC100816646
sly-u.5	101258177	uncharacterized LOC101258177
osa-u.5	4340922	uncharacterized LOC4340922
zma-u.5	103638559	uncharacterized LOC103638559
bra-r.6	103833885	uncharacterized LOC103833885
vvi-u.5	100260315	uncharacterized LOC100260315
ppo-u.5	7497808	uncharacterized LOC7497808
ppo-u.5	7472741	uncharacterized LOC7472741
mtr-u.5	25502111	uncharacterized LOC25502111
tae-r.2	123160758	uncharacterized LOC123160758
tae-r.2	123167451	uncharacterized LOC123167451
tae-r.2	123147862	WD repeat-containing protein 7
hvu-r.1	123411944	uncharacterized LOC123411944
ghi-r.1	107949501	uncharacterized LOC107949501
ghi-r.1	107952127	uncharacterized LOC107952127
bna-r.1	BNAC09G24060D	uncharacterized BNAC09G24060D
sbi-r.1	8085378	WD repeat-containing protein 7
sot-r.1	102580258	uncharacterized LOC102580258
cit-r.1	102611872	uncharacterized LOC102611872
bdi-r.1	100838541	WD repeat-containing protein 7
nta-r.1	107815439	uncharacterized LOC107815439
nta-r.1	107764707	uncharacterized LOC107764707

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042928687.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 2, mito 1, cyto_nucl 1, plas 1, cyto_pero 1, E.R._plas 1

(predict for XP_042928687.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042928687.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_01g039626v5	cre-r.1 for CHLRE_17g739050v5	ath-u.5 for AT4G11270	gma-u.5 for 100818675	gma-u.5 for 100816646	sly-u.5 for 101258177	osa-u.5 for 4340922	zma-u.5 for 103638559	bra-r.6 for 103833885	vvi-u.5 for 100260315	ppo-u.5 for 7497808	ppo-u.5 for 7472741	mtr-u.5 for 25502111	tae-r.2 for 123160758	tae-r.2 for 123167451	tae-r.2 for 123147862	hvu-r.1 for 123411944	ghi-r.1 for 107949501	ghi-r.1 for 107952127	bna-r.1 for BNAC09G24060D	sbi-r.1 for 8085378	sot-r.1 for 102580258	cit-r.1 for 102611872	bdi-r.1 for 100838541	nta-r.1 for 107815439	nta-r.1 for 107764707

Ortholog

Ortholog ID: 9564

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Transducin/WD40 repeat-like superfamily protein

uncharacterized LOC100818675

uncharacterized LOC100816646

uncharacterized LOC101258177

uncharacterized LOC4340922

uncharacterized LOC103638559

uncharacterized LOC103833885

uncharacterized LOC100260315

uncharacterized LOC7497808

uncharacterized LOC7472741

uncharacterized LOC25502111

uncharacterized LOC123160758

uncharacterized LOC123167451

WD repeat-containing protein 7

uncharacterized LOC123411944

uncharacterized LOC107949501

uncharacterized LOC107952127

uncharacterized BNAC09G24060D

WD repeat-containing protein 7

uncharacterized LOC102580258

uncharacterized LOC102611872

WD repeat-containing protein 7

uncharacterized LOC107815439

uncharacterized LOC107764707

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4
gma04141	Protein processing in endoplasmic reticulum	3
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	4
sly04142	Lysosome	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	5
zma04141	Protein processing in endoplasmic reticulum	2
zma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04120	Ubiquitin mediated proteolysis	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	4
ghi04070	Phosphatidylinositol signaling system	4
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	4
ghi04070	Phosphatidylinositol signaling system	4
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	4
sot04144	Endocytosis	3
sot05100	Bacterial invasion of epithelial cells	3
sot04141	Protein processing in endoplasmic reticulum	2
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	8
nta04144	Endocytosis	6
nta05100	Bacterial invasion of epithelial cells	6
nta04141	Protein processing in endoplasmic reticulum	4
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	8
nta04144	Endocytosis	6
nta05100	Bacterial invasion of epithelial cells	6
nta04141	Protein processing in endoplasmic reticulum	4
nta03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

66052113

66057151

826729

100818675

100816646

101258177

4340922

103638559

103833885

100260315

7497808

7472741

25502111

123160758

123167451

123147862

123411944

107949501

107952127

106445176

8085378

102580258

102611872

100838541

107815439

107764707

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_01g039626v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_01g039626v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	2	1	2	1	1	1	1	1	2	1	3	1	2	1	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_01g039626v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_01g039626v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**