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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT4G11270   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100818675   uncharacterized LOC100818675 
 gma-u.5   100816646   uncharacterized LOC100816646 
 vvi-u.5   100260315   uncharacterized LOC100260315 
 ppo-u.5   7497808   uncharacterized LOC7497808 
 ppo-u.5   7472741   uncharacterized LOC7472741 
 mtr-u.5   25502111   uncharacterized LOC25502111 
 sly-u.5   101258177   uncharacterized LOC101258177 
 osa-u.5   4340922   uncharacterized LOC4340922 
 zma-u.5   103638559   uncharacterized LOC103638559 

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Top 50 coexpressed genes to AT4G11270 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G11270 (ath-u.5 coexpression data)

CoexMap"826729"


athAT4G11270 | Entrez gene ID : 826729      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04142 [list] [network] Lysosome (82 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001329550.1 [sequence] [blastp]
NP_192866.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  vacu 1,  golg 1  (predict for NP_001329550.1)
chlo 4,  nucl 4,  mito 1,  vacu 1,  golg 1  (predict for NP_192866.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001329550.1)
mito 7  (predict for NP_192866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G11270

.
ath-r.7
for
AT4G11270

.
ath-m.9
for
AT4G11270

.
ath-e.2
for
AT4G11270

.
ath-m.4.bio
for
AT4G11270

.
ath-m.4.hor
for
AT4G11270

.
ath-m.4.lig
for
AT4G11270

.
ath-m.4.str
for
AT4G11270

.
ath-m.4.tis
for
AT4G11270

.
gma-u.5
for
100818675

.
gma-u.5
for
100816646

.
vvi-u.5
for
100260315

.
ppo-u.5
for
7497808

.
ppo-u.5
for
7472741

.
mtr-u.5
for
25502111

.
sly-u.5
for
101258177

.
osa-u.5
for
4340922

.
zma-u.5
for
103638559

.


Ortholog ID: 9564
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre cre sbi sot cit bdi nta nta
Symbol AT4G11270 LOC100816646 LOC100818675 LOC101258177 LOC4340922 LOC103638559 LOC103833885 LOC100260315 LOC7497808 LOC7472741 LOC25502111 LOC123147862 LOC123160758 LOC123411944 LOC107949501 LOC107952127 BNAC09G24060D CHLRE_01g039626v5 CHLRE_17g739050v5 LOC8085378 LOC102580258 LOC102611872 LOC100838541 LOC107815439 LOC107764707
Function* Transducin/WD40 repeat-like superfamily protein uncharacterized LOC100816646 uncharacterized LOC100818675 uncharacterized LOC101258177 uncharacterized LOC4340922 uncharacterized LOC103638559 uncharacterized LOC103833885 uncharacterized LOC100260315 uncharacterized LOC7497808 uncharacterized LOC7472741 uncharacterized LOC25502111 WD repeat-containing protein 7 uncharacterized LOC123160758 uncharacterized LOC123411944 uncharacterized LOC107949501 uncharacterized LOC107952127 uncharacterized BNAC09G24060D uncharacterized protein uncharacterized protein WD repeat-containing protein 7 uncharacterized LOC102580258 uncharacterized LOC102611872 WD repeat-containing protein 7 uncharacterized LOC107815439 uncharacterized LOC107764707
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 4
sly04142 Lysosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04141 Protein processing in endoplasmic reticulum 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
sot04141 Protein processing in endoplasmic reticulum 2
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 8
nta04144 Endocytosis 6
nta05100 Bacterial invasion of epithelial cells 6
nta04141 Protein processing in endoplasmic reticulum 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 8
nta04144 Endocytosis 6
nta05100 Bacterial invasion of epithelial cells 6
nta04141 Protein processing in endoplasmic reticulum 4
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826729 100816646 100818675 101258177 4340922 103638559 103833885 100260315 7497808 7472741 25502111 123147862 123160758 123411944 107949501 107952127 106445176 66052113 66057151 8085378 102580258 102611872 100838541 107815439 107764707
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