Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g193250v5   uncharacterized protein 
 ath-u.5   emb1067   RNA 2'-phosphotransferase, Tpt1 / KptA family 
 gma-u.5   100805163   tRNA 2'-phosphotransferase 1 
 gma-u.5   100795797   tRNA 2'-phosphotransferase 1-like 
 sly-u.5   101250158   uncharacterized LOC101250158 
 osa-u.5   9267091   uncharacterized LOC9267091 
 zma-u.5   100194044   40S ribosomal protein S20 
 zma-u.5   100273223   RNA 2'-phosphotransferase Tpt1 / KptA family 
 bra-r.6   103866869   tRNA 2'-phosphotransferase 1 
 vvi-u.5   100245349   uncharacterized LOC100245349 
 ppo-u.5   7472650   uncharacterized LOC7472650 
 ppo-u.5   7477755   uncharacterized LOC7477755 
 mtr-u.5   11435035   tRNA 2'-phosphotransferase 1 
 mtr-u.5   25493000   tRNA 2'-phosphotransferase 1 
 tae-r.2   123119298   tRNA 2'-phosphotransferase 1 
 tae-r.2   123077035   tRNA 2'-phosphotransferase 1 
 tae-r.2   123088167   tRNA 2'-phosphotransferase 1 
 hvu-r.1   123411376   tRNA 2'-phosphotransferase 1-like 
 ghi-r.1   107942990   tRNA 2'-phosphotransferase 1 
 ghi-r.1   107944117   tRNA 2'-phosphotransferase 1 
 bna-r.1   125609585   tRNA 2'-phosphotransferase 1-like 
 bna-r.1   106396108   tRNA 2'-phosphotransferase 1 
 bna-r.1   106450908   tRNA 2'-phosphotransferase 1-like 
 sbi-r.1   8068396   tRNA 2'-phosphotransferase 1 
 sot-r.1   102600248   tRNA 2'-phosphotransferase 1-like 
 cit-r.1   102609292   uncharacterized LOC102609292 
 bdi-r.1   100838114   tRNA 2'-phosphotransferase 1 
 nta-r.1   107773662   uncharacterized LOC107773662 
 nta-r.1   107788943   uncharacterized LOC107788943 
 nta-r.1   107808788   uncharacterized LOC107808788 

close


Top 50 coexpressed genes to CHLRE_03g193250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_03g193250v5 (cre-r.1 coexpression data)

CoexMap"66052952"


creCHLRE_03g193250v5 | Entrez gene ID : 66052952    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 1 1 2 2 3 1 2 3 1 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006388 [list] [network] tRNA splicing, via endonucleolytic cleavage and ligation  (9 genes)  IEA  
GO CC
GO MF
GO:0000215 [list] [network] tRNA 2'-phosphotransferase activity  (1 genes)  IEA  
Protein XP_042926339.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  cyto 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_042926339.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_042926339.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g193250v5
ath-u.5
for
emb1067
gma-u.5
for
100805163
gma-u.5
for
100795797
sly-u.5
for
101250158
osa-u.5
for
9267091
zma-u.5
for
100194044
zma-u.5
for
100273223
bra-r.6
for
103866869
vvi-u.5
for
100245349
ppo-u.5
for
7472650
ppo-u.5
for
7477755
mtr-u.5
for
11435035
mtr-u.5
for
25493000
tae-r.2
for
123119298
tae-r.2
for
123077035
tae-r.2
for
123088167
hvu-r.1
for
123411376
ghi-r.1
for
107942990
ghi-r.1
for
107944117
bna-r.1
for
125609585
bna-r.1
for
106396108
bna-r.1
for
106450908
sbi-r.1
for
8068396
sot-r.1
for
102600248
cit-r.1
for
102609292
bdi-r.1
for
100838114
nta-r.1
for
107773662
nta-r.1
for
107788943
nta-r.1
for
107808788


Ortholog ID: 3215
Species cre ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_03g193250v5 emb1067 LOC100805163 LOC100795797 LOC101250158 LOC9267091 LOC100194044 LOC100273223 LOC103866869 LOC100245349 LOC7472650 LOC7477755 LOC11435035 LOC25493000 LOC123088167 LOC123190590 LOC123411376 LOC107932478 LOC125609585 LOC106396108 LOC8068396 LOC102600248 LOC102609292 LOC100838114 LOC107773662 LOC107788943 LOC107808788
Function* uncharacterized protein RNA 2'-phosphotransferase, Tpt1 / KptA family tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like uncharacterized LOC101250158 uncharacterized LOC9267091 40S ribosomal protein S20 RNA 2'-phosphotransferase Tpt1 / KptA family tRNA 2'-phosphotransferase 1 uncharacterized LOC100245349 uncharacterized LOC7472650 uncharacterized LOC7477755 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like putative tRNA 2'-phosphotransferase tRNA 2'-phosphotransferase 1-like tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like uncharacterized LOC102609292 tRNA 2'-phosphotransferase 1 uncharacterized LOC107773662 uncharacterized LOC107788943 uncharacterized LOC107808788
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052952 819141 100805163 100795797 101250158 9267091 100194044 100273223 103866869 100245349 7472650 7477755 11435035 25493000 123088167 123190590 123411376 107932478 125609585 106396108 8068396 102600248 102609292 100838114 107773662 107788943 107808788
The preparation time of this page was 0.1 [sec].