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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106396108   tRNA 2'-phosphotransferase 1 
 bna-r.1   125609585   tRNA 2'-phosphotransferase 1-like 
 bna-r.1   106450908   tRNA 2'-phosphotransferase 1-like 
 bna-r.1   106450910   tRNA 2'-phosphotransferase 1-like 
 bra-r.6   103866869   tRNA 2'-phosphotransferase 1 
 ath-u.5   emb1067   RNA 2'-phosphotransferase, Tpt1 / KptA family 
 ghi-r.1   121214886   putative tRNA 2'-phosphotransferase 
 cit-r.1   102609292   uncharacterized LOC102609292 
 gma-u.5   100805163   tRNA 2'-phosphotransferase 1 
 gma-u.5   100795797   tRNA 2'-phosphotransferase 1-like 
 vvi-u.5   100245349   uncharacterized LOC100245349 
 ppo-u.5   7477755   uncharacterized LOC7477755 
 ppo-u.5   7472650   uncharacterized LOC7472650 
 mtr-u.5   25493000   tRNA 2'-phosphotransferase 1 
 mtr-u.5   11435035   tRNA 2'-phosphotransferase 1 
 sly-u.5   101250158   uncharacterized LOC101250158 
 sot-r.1   102600248   tRNA 2'-phosphotransferase 1-like 
 nta-r.1   107773662   uncharacterized LOC107773662 
 nta-r.1   107808788   uncharacterized LOC107808788 
 nta-r.1   107788943   uncharacterized LOC107788943 
 osa-u.5   9267091   uncharacterized LOC9267091 
 zma-u.5   100273223   RNA 2'-phosphotransferase Tpt1 / KptA family 
 zma-u.5   100194044   40S ribosomal protein S20 
 tae-r.2   123119298   tRNA 2'-phosphotransferase 1 
 tae-r.2   123077035   tRNA 2'-phosphotransferase 1 
 tae-r.2   123088167   tRNA 2'-phosphotransferase 1 
 hvu-r.1   123411376   tRNA 2'-phosphotransferase 1-like 
 sbi-r.1   8068396   tRNA 2'-phosphotransferase 1 
 bdi-r.1   100838114   tRNA 2'-phosphotransferase 1 
 cre-r.1   CHLRE_03g193250v5   uncharacterized protein 

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Top 50 coexpressed genes to 106396108 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106396108 (bna-r.1 coexpression data)

CoexMap"106396108"


bnaLOC106396108 | Entrez gene ID : 106396108    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 1 2 1 2 2 1 1 3 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006388 [list] [network] tRNA splicing, via endonucleolytic cleavage and ligation  (26 genes)  IEA  
GO CC
GO MF
GO:0000215 [list] [network] tRNA 2'-phosphotransferase activity  (7 genes)  IEA  
Protein XP_013691861.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  mito 1,  extr 1,  pero 1,  cysk 1,  chlo_mito 1  (predict for XP_013691861.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_013691861.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106396108
bna-r.1
for
125609585
bna-r.1
for
106450908
bna-r.1
for
106450910
bra-r.6
for
103866869
ath-u.5
for
emb1067
ghi-r.1
for
121214886
cit-r.1
for
102609292
gma-u.5
for
100805163
gma-u.5
for
100795797
vvi-u.5
for
100245349
ppo-u.5
for
7477755
ppo-u.5
for
7472650
mtr-u.5
for
25493000
mtr-u.5
for
11435035
sly-u.5
for
101250158
sot-r.1
for
102600248
nta-r.1
for
107773662
nta-r.1
for
107808788
nta-r.1
for
107788943
osa-u.5
for
9267091
zma-u.5
for
100273223
zma-u.5
for
100194044
tae-r.2
for
123119298
tae-r.2
for
123077035
tae-r.2
for
123088167
hvu-r.1
for
123411376
sbi-r.1
for
8068396
bdi-r.1
for
100838114
cre-r.1
for
CHLRE_03g193250v5


Ortholog ID: 3215
Species bna bna bra ath ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC106396108 LOC125609585 LOC103866869 emb1067 LOC107932478 LOC102609292 LOC100805163 LOC100795797 LOC100245349 LOC7477755 LOC7472650 LOC25493000 LOC11435035 LOC101250158 LOC102600248 LOC107773662 LOC107808788 LOC107788943 LOC9267091 LOC100273223 LOC100194044 LOC123088167 LOC123190590 LOC123411376 LOC8068396 LOC100838114 CHLRE_03g193250v5
Function* tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like tRNA 2'-phosphotransferase 1 RNA 2'-phosphotransferase, Tpt1 / KptA family putative tRNA 2'-phosphotransferase uncharacterized LOC102609292 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like uncharacterized LOC100245349 uncharacterized LOC7477755 uncharacterized LOC7472650 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 uncharacterized LOC101250158 tRNA 2'-phosphotransferase 1-like uncharacterized LOC107773662 uncharacterized LOC107808788 uncharacterized LOC107788943 uncharacterized LOC9267091 RNA 2'-phosphotransferase Tpt1 / KptA family 40S ribosomal protein S20 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
sbi03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106396108 125609585 103866869 819141 107932478 102609292 100805163 100795797 100245349 7477755 7472650 25493000 11435035 101250158 102600248 107773662 107808788 107788943 9267091 100273223 100194044 123088167 123190590 123411376 8068396 100838114 66052952
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