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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g372500v5   uncharacterized protein 
 ath-u.5   ABO1   IKI3 family protein 
 gma-u.5   100526992   elongator complex protein 
 sly-u.5   101260050   elongator complex protein 1 
 osa-u.5   4343611   elongator complex protein 1 
 zma-u.5   100193043   uncharacterized LOC100193043 
 bra-r.6   103846550   elongator complex protein 1 
 vvi-u.5   100247912   elongator complex protein 1 
 ppo-u.5   7457930   elongator complex protein 1-like 
 ppo-u.5   7458593   elongator complex protein 1 
 mtr-u.5   25485699   elongator complex protein 1 
 tae-r.2   123044539   elongator complex protein 1 
 tae-r.2   123052409   elongator complex protein 1 
 tae-r.2   123188251   elongator complex protein 1 
 hvu-r.1   123425686   elongator complex protein 1 
 ghi-r.1   107938197   elongator complex protein 1 
 ghi-r.1   107897823   elongator complex protein 1 
 bna-r.1   106372276   elongator complex protein 1 
 bna-r.1   125579043   elongator complex protein 1-like 
 sbi-r.1   8080320   elongator complex protein 1 
 sot-r.1   102604163   elongator complex protein 1 
 cit-r.1   102610103   elongator complex protein 1 
 bdi-r.1   100835917   elongator complex protein 1 
 nta-r.1   107822647   elongator complex protein 1 
 nta-r.1   107813218   elongator complex protein 1 

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Top 50 coexpressed genes to CHLRE_08g372500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g372500v5 (cre-r.1 coexpression data)

CoexMap"66054409"


creCHLRE_08g372500v5 | Entrez gene ID : 66054409    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002926 [list] [network] tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation  (2 genes)  IEA  
GO CC
GO:0033588 [list] [network] elongator holoenzyme complex  (6 genes)  IEA  
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO MF
GO:0000049 [list] [network] tRNA binding  (34 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042922060.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  cyto 2,  E.R. 2,  cyto_E.R. 2,  nucl 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_042922060.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042922060.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g372500v5
ath-u.5
for
ABO1
gma-u.5
for
100526992
sly-u.5
for
101260050
osa-u.5
for
4343611
zma-u.5
for
100193043
bra-r.6
for
103846550
vvi-u.5
for
100247912
ppo-u.5
for
7457930
ppo-u.5
for
7458593
mtr-u.5
for
25485699
tae-r.2
for
123044539
tae-r.2
for
123052409
tae-r.2
for
123188251
hvu-r.1
for
123425686
ghi-r.1
for
107938197
ghi-r.1
for
107897823
bna-r.1
for
106372276
bna-r.1
for
125579043
sbi-r.1
for
8080320
sot-r.1
for
102604163
cit-r.1
for
102610103
bdi-r.1
for
100835917
nta-r.1
for
107822647
nta-r.1
for
107813218


Ortholog ID: 10295
Species cre ath gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_08g372500v5 ABO1 LOC100526992 LOC101260050 LOC4343611 LOC100193043 LOC103846550 LOC100247912 LOC7457930 LOC7458593 LOC25485699 LOC123044539 LOC123052409 LOC123188251 LOC123425686 LOC107938197 LOC107897823 LOC106372276 LOC125579043 LOC8080320 LOC102604163 LOC102610103 LOC100835917 LOC107822647 LOC107813218
Function* uncharacterized protein IKI3 family protein elongator complex protein elongator complex protein 1 elongator complex protein 1 uncharacterized LOC100193043 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1-like elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1-like elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66054409 831213 100526992 101260050 4343611 100193043 103846550 100247912 7457930 7458593 25485699 123044539 123052409 123188251 123425686 107938197 107897823 106372276 125579043 8080320 102604163 102610103 100835917 107822647 107813218
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