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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897823   elongator complex protein 1 
 ghi-r.1   107938197   elongator complex protein 1 
 ath-u.5   ABO1   IKI3 family protein 
 bra-r.6   103846550   elongator complex protein 1 
 bna-r.1   106372276   elongator complex protein 1 
 bna-r.1   125579043   elongator complex protein 1-like 
 cit-r.1   102610103   elongator complex protein 1 
 gma-u.5   100526992   elongator complex protein 
 vvi-u.5   100247912   elongator complex protein 1 
 ppo-u.5   7457930   elongator complex protein 1-like 
 ppo-u.5   7458593   elongator complex protein 1 
 mtr-u.5   25485699   elongator complex protein 1 
 sly-u.5   101260050   elongator complex protein 1 
 sot-r.1   102604163   elongator complex protein 1 
 nta-r.1   107813218   elongator complex protein 1 
 nta-r.1   107822647   elongator complex protein 1 
 osa-u.5   4343611   elongator complex protein 1 
 zma-u.5   100193043   uncharacterized LOC100193043 
 tae-r.2   123188251   elongator complex protein 1 
 tae-r.2   123044539   elongator complex protein 1 
 tae-r.2   123052409   elongator complex protein 1 
 hvu-r.1   123425686   elongator complex protein 1 
 sbi-r.1   8080320   elongator complex protein 1 
 bdi-r.1   100835917   elongator complex protein 1 
 cre-r.1   CHLRE_08g372500v5   uncharacterized protein 

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Top 50 coexpressed genes to 107897823 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897823 (ghi-r.1 coexpression data)

CoexMap"107897823"


ghiLOC107897823 | Entrez gene ID : 107897823    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 2 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002926 [list] [network] tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation  (5 genes)  IEA  
GO CC
GO:0033588 [list] [network] elongator holoenzyme complex  (14 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0000049 [list] [network] tRNA binding  (60 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016678892.2 [sequence] [blastp]
XP_016678893.2 [sequence] [blastp]
XP_040934076.1 [sequence] [blastp]
XP_040934077.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_016678892.2)
nucl 4,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_016678893.2)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040934076.1)
nucl 3,  chlo 2,  plas 2,  cyto_nucl 2  (predict for XP_040934077.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016678892.2)
other 6  (predict for XP_016678893.2)
other 7  (predict for XP_040934076.1)
other 6  (predict for XP_040934077.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897823
ghi-r.1
for
107938197
ath-u.5
for
ABO1
bra-r.6
for
103846550
bna-r.1
for
106372276
bna-r.1
for
125579043
cit-r.1
for
102610103
gma-u.5
for
100526992
vvi-u.5
for
100247912
ppo-u.5
for
7457930
ppo-u.5
for
7458593
mtr-u.5
for
25485699
sly-u.5
for
101260050
sot-r.1
for
102604163
nta-r.1
for
107813218
nta-r.1
for
107822647
osa-u.5
for
4343611
zma-u.5
for
100193043
tae-r.2
for
123188251
tae-r.2
for
123044539
tae-r.2
for
123052409
hvu-r.1
for
123425686
sbi-r.1
for
8080320
bdi-r.1
for
100835917
cre-r.1
for
CHLRE_08g372500v5


Ortholog ID: 10295
Species ghi ghi ath bra bna bna cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107897823 LOC107938197 ABO1 LOC103846550 LOC106372276 LOC125579043 LOC102610103 LOC100526992 LOC100247912 LOC7457930 LOC7458593 LOC25485699 LOC101260050 LOC102604163 LOC107813218 LOC107822647 LOC4343611 LOC100193043 LOC123188251 LOC123044539 LOC123052409 LOC123425686 LOC8080320 LOC100835917 CHLRE_08g372500v5
Function* elongator complex protein 1 elongator complex protein 1 IKI3 family protein elongator complex protein 1 elongator complex protein 1 elongator complex protein 1-like elongator complex protein 1 elongator complex protein elongator complex protein 1 elongator complex protein 1-like elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 uncharacterized LOC100193043 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 elongator complex protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897823 107938197 831213 103846550 106372276 125579043 102610103 100526992 100247912 7457930 7458593 25485699 101260050 102604163 107813218 107822647 4343611 100193043 123188251 123044539 123052409 123425686 8080320 100835917 66054409
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