ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107769451	uncharacterized LOC107769451
sly-u.5	101252722	uncharacterized LOC101252722
sot-r.1	102593407	uncharacterized LOC102593407
ath-u.5	AT5G13880	cotton fiber protein
ath-u.5	AT5G47920	transcription elongation factor
gma-u.5	100780939	uncharacterized LOC100780939
gma-u.5	100781263	uncharacterized LOC100781263
gma-u.5	100807332	uncharacterized LOC100807332
bra-r.6	103837235	uncharacterized LOC103837235
bra-r.6	103854510	uncharacterized LOC103854510
bra-r.6	103874918	uncharacterized LOC103874918
vvi-u.5	100267772	uncharacterized LOC100267772
vvi-u.5	100253147	uncharacterized LOC100253147
ppo-u.5	7457997	uncharacterized LOC7457997
mtr-u.5	11435740	uncharacterized LOC11435740
mtr-u.5	11431449	uncharacterized LOC11431449
ghi-r.1	107888146	uncharacterized LOC107888146
ghi-r.1	107949752	uncharacterized LOC107949752
bna-r.1	111208242	uncharacterized LOC111208242
bna-r.1	106431152	uncharacterized LOC106431152
cit-r.1	102624355	hypothetical protein
cit-r.1	102612020	uncharacterized LOC102612020
osa-u.5	4329435	uncharacterized LOC4329435
osa-u.5	4335641	uncharacterized LOC4335641
zma-u.5	100276179	uncharacterized LOC100276179
tae-r.2	123053131	uncharacterized LOC123053131
tae-r.2	123045292	uncharacterized LOC123045292
tae-r.2	123154753	uncharacterized LOC123154753
hvu-r.1	123430198	uncharacterized LOC123430198
sbi-r.1	8070785	uncharacterized LOC8070785
bdi-r.1	100835173	uncharacterized LOC100835173
bdi-r.1	100826669	uncharacterized LOC100826669

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016444152.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 2, mito 1, extr 1, E.R._vacu 1

(predict for XP_016444152.1)

Subcellular
localization
TargetP

chlo 2

(predict for XP_016444152.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107769451	sly-u.5 for 101252722	sot-r.1 for 102593407	ath-u.5 for AT5G13880	ath-u.5 for AT5G47920	gma-u.5 for 100780939	gma-u.5 for 100781263	gma-u.5 for 100807332	bra-r.6 for 103837235	bra-r.6 for 103854510	bra-r.6 for 103874918	vvi-u.5 for 100267772	vvi-u.5 for 100253147	ppo-u.5 for 7457997	mtr-u.5 for 11435740	mtr-u.5 for 11431449	ghi-r.1 for 107888146	ghi-r.1 for 107949752	bna-r.1 for 111208242	bna-r.1 for 106431152	cit-r.1 for 102624355	cit-r.1 for 102612020	osa-u.5 for 4329435	osa-u.5 for 4335641	zma-u.5 for 100276179	tae-r.2 for 123053131	tae-r.2 for 123045292	tae-r.2 for 123154753	hvu-r.1 for 123430198	sbi-r.1 for 8070785	bdi-r.1 for 100835173	bdi-r.1 for 100826669

Ortholog

Ortholog ID: 3380

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107769451

uncharacterized LOC101252722

uncharacterized LOC102593407

cotton fiber protein

transcription elongation factor

uncharacterized LOC100780939

uncharacterized LOC100781263

uncharacterized LOC100807332

uncharacterized LOC103837235

uncharacterized LOC103874918

uncharacterized LOC103846532

uncharacterized LOC100267772

uncharacterized LOC100253147

uncharacterized LOC7457997

uncharacterized LOC11435740

uncharacterized LOC11431449

uncharacterized LOC107888146

uncharacterized LOC121210955

uncharacterized LOC111208242

uncharacterized BNAC02G38310D

uncharacterized LOC106370594

hypothetical protein

uncharacterized LOC102612020

uncharacterized LOC4329435

uncharacterized LOC4335641

uncharacterized LOC100276179

uncharacterized LOC123154753

uncharacterized LOC123159108

uncharacterized LOC123185423

uncharacterized LOC123430198

uncharacterized LOC8070785

uncharacterized LOC100835173

uncharacterized LOC100826669

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	6
ppo04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi03060	Protein export	2
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

107769451

101252722

102593407

831235

834843

100780939

100781263

100807332

103837235

103874918

103846532

100267772

100253147

7457997

11435740

11431449

107888146

121210955

111208242

106429002

106370594

102624355

102612020

4329435

4335641

100276179

123154753

123159108

123185423

123430198

8070785

100835173

100826669

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107769451 (nta-r.1 coexpression data)

Top 50 enrichment test to 107769451 (nta-r.1 coexpression data)


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	1	2	3	3	2	1	2	2	2	2	2	1	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107769451 (nta-r.1 coexpression data)

Top 50 enrichment test to 107769451 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**