ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107772149	PH, RCC1 and FYVE domains-containing protein 1-like
nta-r.1	107782649	PH, RCC1 and FYVE domains-containing protein 1-like
nta-r.1	107789916	PH, RCC1 and FYVE domains-containing protein 1-like
nta-r.1	107793216	PH, RCC1 and FYVE domains-containing protein 1-like
sly-u.5	101256573	PH, RCC1 and FYVE domains-containing protein 1
sly-u.5	101257851	PH, RCC1 and FYVE domains-containing protein 1
sot-r.1	102600493	uncharacterized LOC102600493
sot-r.1	102590844	uncharacterized LOC102590844
ath-u.5	AT5G12350	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT5G19420	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT1G65920	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
gma-u.5	100806439	PH, RCC1 and FYVE domains-containing protein 1
gma-u.5	100802464	PH, RCC1 and FYVE domains-containing protein 1
gma-u.5	100797527	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103849089	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103845756	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103846644	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100253065	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100243300	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100244665	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	7454864	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	7460236	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	7476847	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	112419908	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	112417506	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	11406734	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107891452	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107895189	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107912868	PH, RCC1 and FYVE domains-containing protein 1
bna-r.1	106434266	PH, RCC1 and FYVE domains-containing protein 1-like
bna-r.1	106403596	PH, RCC1 and FYVE domains-containing protein 1-like
cit-r.1	102623335	PH, RCC1 and FYVE domains-containing protein 1
cit-r.1	102612328	PH, RCC1 and FYVE domains-containing protein 1
cit-r.1	102623949	PH, RCC1 and FYVE domains-containing protein 1
osa-u.5	4325746	PH, RCC1 and FYVE domains-containing protein 1
osa-u.5	4336778	PH, RCC1 and FYVE domains-containing protein 1
zma-u.5	103653921	Putative regulator of chromosome condensation (RCC1) family protein
zma-u.5	103646027	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
zma-u.5	103636281	Putative regulator of chromosome condensation (RCC1) family protein
tae-r.2	123054117	PH, RCC1 and FYVE domains-containing protein 1
tae-r.2	123080719	PH, RCC1 and FYVE domains-containing protein 1
tae-r.2	123190415	PH, RCC1 and FYVE domains-containing protein 1
hvu-r.1	123445529	PH, RCC1 and FYVE domains-containing protein 1-like
hvu-r.1	123427836	PH, RCC1 and FYVE domains-containing protein 1
hvu-r.1	123401550	PH, RCC1 and FYVE domains-containing protein 1-like
sbi-r.1	8057696	uncharacterized LOC8057696
sbi-r.1	8077365	uncharacterized LOC8077365
bdi-r.1	100842512	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100836916	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100838586	PH, RCC1 and FYVE domains-containing protein 1
cre-r.1	CHLRE_16g691050v5	uncharacterized protein

Top 50 coexpressed genes to 107772149 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107772149 (nta-r.1 coexpression data)

CoexMap"107772149"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(4462 genes)

IEA

Protein

XP_016447122.1 [sequence] [blastp]
XP_016447124.1 [sequence] [blastp]
XP_016447125.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_016447122.1)
nucl 10	(predict for XP_016447124.1)
nucl 10	(predict for XP_016447125.1)

Subcellular
localization
TargetP

other 8	(predict for XP_016447122.1)
other 9	(predict for XP_016447124.1)
other 9	(predict for XP_016447125.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107772149	nta-r.1 for 107782649	nta-r.1 for 107789916	nta-r.1 for 107793216	sly-u.5 for 101256573	sly-u.5 for 101257851	sot-r.1 for 102600493	sot-r.1 for 102590844	ath-u.5 for AT5G12350	ath-u.5 for AT5G19420	ath-u.5 for AT1G65920	gma-u.5 for 100806439	gma-u.5 for 100802464	gma-u.5 for 100797527	bra-r.6 for 103849089	bra-r.6 for 103845756	bra-r.6 for 103846644	vvi-u.5 for 100253065	vvi-u.5 for 100243300	vvi-u.5 for 100244665	ppo-u.5 for 7454864	ppo-u.5 for 7460236	ppo-u.5 for 7476847	mtr-u.5 for 112419908	mtr-u.5 for 112417506	mtr-u.5 for 11406734	ghi-r.1 for 107891452	ghi-r.1 for 107895189	ghi-r.1 for 107912868	bna-r.1 for 106434266	bna-r.1 for 106403596	cit-r.1 for 102623335	cit-r.1 for 102612328	cit-r.1 for 102623949	osa-u.5 for 4325746	osa-u.5 for 4336778	zma-u.5 for 103653921	zma-u.5 for 103646027	zma-u.5 for 103636281	tae-r.2 for 123054117	tae-r.2 for 123080719	tae-r.2 for 123190415	hvu-r.1 for 123445529	hvu-r.1 for 123427836	hvu-r.1 for 123401550	sbi-r.1 for 8057696	sbi-r.1 for 8077365	bdi-r.1 for 100842512	bdi-r.1 for 100836916	bdi-r.1 for 100838586	cre-r.1 for CHLRE_16g691050v5

Ortholog

Ortholog ID: 695

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

G93

Function^*

PH, RCC1 and FYVE domains-containing protein 1-like