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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107790860   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 nta-r.1   107831361   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sly-u.5   101257316   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sot-r.1   102586994   pentatricopeptide repeat-containing protein At4g21065 
 ath-u.5   AT3G61170   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100817126   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 bra-r.6   103841939   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 vvi-u.5   100247159   putative pentatricopeptide repeat-containing protein At3g15130 
 mtr-u.5   11432598   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ghi-r.1   107911957   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ghi-r.1   107957259   pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 
 cit-r.1   127900991   pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 
 cit-r.1   102628388   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 osa-u.5   9270928   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 

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Top 50 coexpressed genes to 107790860 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107790860 (nta-r.1 coexpression data)

CoexMap"107790860"


ntaLOC107790860 | Entrez gene ID : 107790860      
Species nta sly sot ath gma bra vvi mtr ghi cit osa sbi tae bna hvu ppo zma cre bdi
Paralog 2 1 1 1 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016468305.2 [sequence] [blastp]
XP_016468307.2 [sequence] [blastp]
XP_016468308.2 [sequence] [blastp]
XP_075094351.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016468305.2)
chlo 7,  extr 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016468307.2)
chlo 7,  extr 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016468308.2)
chlo 7,  extr 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_075094351.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_016468305.2)
mito 6,  other 3  (predict for XP_016468307.2)
mito 6,  other 3  (predict for XP_016468308.2)
mito 6,  other 3  (predict for XP_075094351.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107790860
nta-r.1
for
107831361
sly-u.5
for
101257316
sot-r.1
for
102586994
ath-u.5
for
AT3G61170
gma-u.5
for
100817126
bra-r.6
for
103841939
vvi-u.5
for
100247159
mtr-u.5
for
11432598
ghi-r.1
for
107911957
ghi-r.1
for
107957259
cit-r.1
for
127900991
cit-r.1
for
102628388
osa-u.5
for
9270928


Ortholog ID: 10837
Species nta nta sly sot ath gma bra vvi mtr ghi ghi cit cit osa
Symbol LOC107790860 LOC107831361 LOC101257316 LOC102586994 AT3G61170 LOC100817126 LOC103841939 LOC100247159 LOC11432598 LOC107911957 LOC107957259 LOC127900991 LOC102628388 LOC9270928
Function* pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At4g21065 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g15130 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107790860 107831361 101257316 102586994 825289 100817126 103841939 100247159 11432598 107911957 107957259 127900991 102628388 9270928
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