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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107957259   pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 
 ghi-r.1   107911957   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ath-u.5   AT3G61170   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103841939   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 cit-r.1   127900991   pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 
 cit-r.1   102628388   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 gma-u.5   100817126   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 vvi-u.5   100247159   putative pentatricopeptide repeat-containing protein At3g15130 
 mtr-u.5   11432598   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sly-u.5   101257316   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sot-r.1   102586994   pentatricopeptide repeat-containing protein At4g21065 
 nta-r.1   107831361   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 nta-r.1   107790860   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 osa-u.5   9270928   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 

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Top 50 coexpressed genes to 107957259 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107957259 (ghi-r.1 coexpression data)

CoexMap"107957259"


ghiLOC107957259 | Entrez gene ID : 107957259    
Species ghi ath bra cit gma vvi mtr sly sot nta osa zma cre ppo sbi tae bna hvu bdi
Paralog 2 1 1 2 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016748225.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_016748225.2)
Subcellular
localization
TargetP
scret 2  (predict for XP_016748225.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107957259
ghi-r.1
for
107911957
ath-u.5
for
AT3G61170
bra-r.6
for
103841939
cit-r.1
for
127900991
cit-r.1
for
102628388
gma-u.5
for
100817126
vvi-u.5
for
100247159
mtr-u.5
for
11432598
sly-u.5
for
101257316
sot-r.1
for
102586994
nta-r.1
for
107831361
nta-r.1
for
107790860
osa-u.5
for
9270928


Ortholog ID: 10837
Species ghi ghi ath bra cit cit gma vvi mtr sly sot nta nta osa
Symbol LOC107957259 LOC107911957 AT3G61170 LOC103841939 LOC127900991 LOC102628388 LOC100817126 LOC100247159 LOC11432598 LOC101257316 LOC102586994 LOC107831361 LOC107790860 LOC9270928
Function* pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At3g15130 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107957259 107911957 825289 103841939 127900991 102628388 100817126 100247159 11432598 101257316 102586994 107831361 107790860 9270928
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