ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107804692	ASI1-immunoprecipitated protein 2
nta-r.1	107760138	ASI1-immunoprecipitated protein 2
sly-u.5	101244850	ASI1-immunoprecipitated protein 2
sot-r.1	102589655	uncharacterized LOC102589655
ath-u.5	AT3G02890	RING/FYVE/PHD zinc finger superfamily protein
ath-u.5	AT5G16680	RING/FYVE/PHD zinc finger superfamily protein
gma-u.5	100806639	uncharacterized LOC100806639
gma-u.5	100797363	uncharacterized LOC100797363
gma-u.5	100784908	uncharacterized LOC100784908
bra-r.6	103856209	uncharacterized LOC103856209
bra-r.6	103846310	uncharacterized LOC103846310
vvi-u.5	100261463	uncharacterized LOC100261463
vvi-u.5	100243800	uncharacterized LOC100243800
ppo-u.5	7491074	uncharacterized LOC7491074
ppo-u.5	7465630	uncharacterized LOC7465630
mtr-u.5	25479298	uncharacterized LOC25479298
mtr-u.5	11423541	uncharacterized LOC11423541
ghi-r.1	107950612	uncharacterized LOC107950612
ghi-r.1	107963411	uncharacterized LOC107963411
ghi-r.1	107951763	uncharacterized LOC107951763
bna-r.1	106383633	uncharacterized LOC106383633
bna-r.1	106423786	uncharacterized LOC106423786
bna-r.1	111204322	uncharacterized LOC111204322
cit-r.1	102623421	uncharacterized LOC102623421
osa-u.5	4352121	ASI1-immunoprecipitated protein 2
osa-u.5	4350304	ASI1-immunoprecipitated protein 2
zma-u.5	103629382	RING/FYVE/PHD zinc finger superfamily protein
tae-r.2	123104451	uncharacterized LOC123104451
tae-r.2	123122616	uncharacterized LOC123122616
tae-r.2	123112744	uncharacterized LOC123112744
hvu-r.1	123399987	uncharacterized LOC123399987
sbi-r.1	8066900	uncharacterized LOC8066900
bdi-r.1	100846635	uncharacterized LOC100846635
bdi-r.1	100845718	uncharacterized LOC100845718

Top 50 coexpressed genes to 107804692 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107804692 (nta-r.1 coexpression data)

CoexMap"107804692"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0034244 [list] [network] negative regulation of transcription elongation by RNA polymerase II

(13 genes)

IEA

GO CC

GO MF

GO:0140566 [list] [network] histone reader activity

(13 genes)

IEA

Protein

XP_016484103.2 [sequence] [blastp]
XP_016484104.2 [sequence] [blastp]
XP_016484106.2 [sequence] [blastp]
XP_016484107.2 [sequence] [blastp]
XP_016484108.2 [sequence] [blastp]
XP_016484109.2 [sequence] [blastp]
XP_075107966.1 [sequence] [blastp]
XP_075107967.1 [sequence] [blastp]
XP_075107968.1 [sequence] [blastp]
XP_075107969.1 [sequence] [blastp]
XP_075107970.1 [sequence] [blastp]
XP_075107971.1 [sequence] [blastp]
XP_075107972.1 [sequence] [blastp]
XP_075107973.1 [sequence] [blastp]
XP_075107974.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_016484103.2)
nucl 9	(predict for XP_016484104.2)
nucl 9	(predict for XP_016484106.2)
nucl 9	(predict for XP_016484107.2)
nucl 9	(predict for XP_016484108.2)
nucl 9	(predict for XP_016484109.2)
nucl 10	(predict for XP_075107966.1)
nucl 9	(predict for XP_075107967.1)
nucl 9	(predict for XP_075107968.1)
nucl 9	(predict for XP_075107969.1)
nucl 9	(predict for XP_075107970.1)
nucl 9	(predict for XP_075107971.1)
nucl 9	(predict for XP_075107972.1)
nucl 9	(predict for XP_075107973.1)
nucl 9	(predict for XP_075107974.1)

Subcellular
localization
TargetP

other 6	(predict for XP_016484103.2)
other 6	(predict for XP_016484104.2)
other 6	(predict for XP_016484106.2)
other 5	(predict for XP_016484107.2)
chlo 7, other 4	(predict for XP_016484108.2)
other 7	(predict for XP_016484109.2)
chlo 8, other 4	(predict for XP_075107966.1)
other 6	(predict for XP_075107967.1)
other 5	(predict for XP_075107968.1)
chlo 7, other 4	(predict for XP_075107969.1)
other 7	(predict for XP_075107970.1)
other 8	(predict for XP_075107971.1)
other 8	(predict for XP_075107972.1)
other 5, chlo 5	(predict for XP_075107973.1)
other 5, chlo 5	(predict for XP_075107974.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107804692	nta-r.1 for 107760138	sly-u.5 for 101244850	sot-r.1 for 102589655	ath-u.5 for AT3G02890	ath-u.5 for AT5G16680	gma-u.5 for 100806639	gma-u.5 for 100797363	gma-u.5 for 100784908	bra-r.6 for 103856209	bra-r.6 for 103846310	vvi-u.5 for 100261463	vvi-u.5 for 100243800	ppo-u.5 for 7491074	ppo-u.5 for 7465630	mtr-u.5 for 25479298	mtr-u.5 for 11423541	ghi-r.1 for 107950612	ghi-r.1 for 107963411	ghi-r.1 for 107951763	bna-r.1 for 106383633	bna-r.1 for 106423786	bna-r.1 for 111204322	cit-r.1 for 102623421	osa-u.5 for 4352121	osa-u.5 for 4350304	zma-u.5 for 103629382	tae-r.2 for 123104451	tae-r.2 for 123122616	tae-r.2 for 123112744	hvu-r.1 for 123399987	sbi-r.1 for 8066900	bdi-r.1 for 100846635	bdi-r.1 for 100845718

Ortholog

Ortholog ID: 4384

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

ASI1-immunoprecipitated protein 2

uncharacterized LOC102589655

RING/FYVE/PHD zinc finger superfamily protein

uncharacterized LOC100797363

uncharacterized LOC100784908

uncharacterized LOC100781187

uncharacterized LOC103856209

uncharacterized LOC103846310

uncharacterized LOC100261463

uncharacterized LOC100243800

uncharacterized LOC7491074

uncharacterized LOC7465630

uncharacterized LOC25479298

uncharacterized LOC11423541

uncharacterized LOC107950612

uncharacterized LOC107963411

uncharacterized LOC107912775

uncharacterized LOC106383633

uncharacterized LOC106432811

uncharacterized LOC106369843

uncharacterized LOC102623421

ASI1-immunoprecipitated protein 2

RING/FYVE/PHD zinc finger superfamily protein

uncharacterized LOC123112744

uncharacterized LOC123122221

uncharacterized LOC123104814

uncharacterized LOC123399987

uncharacterized LOC8066900

uncharacterized LOC100846635

uncharacterized LOC100845718

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03083	Polycomb repressive complex	2
ath03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03250	Viral life cycle - HIV-1	2
vvi00562	Inositol phosphate metabolism	2
vvi04070	Phosphatidylinositol signaling system	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	3
ppo04070	Phosphatidylinositol signaling system	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	4
mtr03040	Spliceosome	3
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	4
ghi03040	Spliceosome	3
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	2
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	2
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

107804692

107760138

101244850

102589655

821192

831529

100797363

100784908

100781187

103856209

103846310

100261463

100243800

7491074

7465630

25479298

11423541

107950612

107963411

107912775

106383633

106432811

106369843

102623421

4352121

4350304

103629382

123112744

123122221

123104814

123399987

8066900

100846635

100845718

The preparation time of this page was 0.1 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	3	2	2	2	2	3	3	1	2	1	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107804692 (nta-r.1 coexpression data)

Top 50 enrichment test to 107804692 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**