[←][→] ath   At5g16680 Gene
functional annotation
Function   RING/FYVE/PHD zinc finger superfamily protein      
GO BP
GO:0009966 [list] [network] regulation of signal transduction  (396 genes)  IEA  
GO:2000241 [list] [network] regulation of reproductive process  (507 genes)  IEA  
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO:0048367 [list] [network] shoot system development  (1318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001332208.1  NP_197170.3 
BLAST NP_001332208.1  NP_197170.3 
Orthologous [Ortholog page] AT3G02890 (ath)  LOC4350304 (osa)  LOC4352121 (osa)  LOC7465630 (ppo)  LOC7491074 (ppo)  LOC11423541 (mtr)  LOC18096963 (ppo)  LOC25479298 (mtr)  LOC100781187 (gma)  LOC100784908 (gma)  LOC100797363 (gma)  LOC100806639 (gma)  LOC101244850 (sly)  LOC102669922 (gma)  LOC103843647 (bra)  LOC103846310 (bra)  LOC103856209 (bra)  LOC123104451 (tae)  LOC123104814 (tae)  LOC123112744 (tae)  LOC123113099 (tae)  LOC123122221 (tae)  LOC123122616 (tae)  LOC123399987 (hvu) 
Subcellular
localization
wolf
nucl 7,  cysk 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001332208.1)
nucl 7,  cysk 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_197170.3)
Subcellular
localization
TargetP
mito 6  (predict for NP_001332208.1)
mito 6  (predict for NP_197170.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with AT5G16680 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.4 AT3G62900 CW-type Zinc Finger [detail] 825465
8.7 HAF01 HAC13 protein (HAC13) [detail] 840169
8.7 SUO protein SUO [detail] 823960
8.5 TOP1BETA DNA topoisomerase 1 beta [detail] 835624
8.5 AT5G22450 spectrin beta chain, brain [detail] 832306
8.4 PKDM7D Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [detail] 837384
8.1 AT3G21295 Tudor/PWWP/MBT superfamily protein [detail] 5008017
7.3 AT4G30790 autophagy-like protein [detail] 829202
6.9 EDA16 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein [detail] 842407
6.9 AT5G04460 RING/U-box superfamily protein [detail] 830324
6.7 AT1G69060 Chaperone DnaJ-domain superfamily protein [detail] 843238
6.6 AT2G20320 DENN (AEX-3) domain-containing protein [detail] 816551
Coexpressed
gene list		 [Coexpressed gene list for AT5G16680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250077_at
250077_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250077_at
250077_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250077_at
250077_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831529      
Refseq ID (protein) NP_001332208.1 
NP_197170.3 


The preparation time of this page was 0.1 [sec].