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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107821580   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 nta-r.1   107774565   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 sly-u.5   101251033   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 sot-r.1   102599266   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 gma-u.5   100788616   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 bra-r.6   103866882   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 vvi-u.5   100241999   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 ppo-u.5   7488898   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 ghi-r.1   107911582   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 ghi-r.1   107941751   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 bna-r.1   106450903   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 bna-r.1   106396174   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 cit-r.1   102623602   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 

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Top 50 coexpressed genes to 107821580 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107821580 (nta-r.1 coexpression data)

CoexMap"107821580"


ntaLOC107821580 | Entrez gene ID : 107821580      
Species nta sly sot gma bra vvi ppo ghi bna cit sbi osa mtr tae ath hvu zma cre bdi
Paralog 2 1 1 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016503499.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 1,  chlo 1,  nucl 1,  cysk_plas 1  (predict for XP_016503499.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_016503499.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107821580
nta-r.1
for
107774565
sly-u.5
for
101251033
sot-r.1
for
102599266
gma-u.5
for
100788616
bra-r.6
for
103866882
vvi-u.5
for
100241999
ppo-u.5
for
7488898
ghi-r.1
for
107911582
ghi-r.1
for
107941751
bna-r.1
for
106450903
bna-r.1
for
106396174
cit-r.1
for
102623602


Ortholog ID: 13426
Species nta nta sly sot gma bra vvi ppo ghi ghi bna bna cit
Symbol LOC107821580 LOC107774565 LOC101251033 LOC102599266 LOC100788616 LOC103866882 LOC100241999 LOC7488898 LOC107911582 LOC107941751 LOC106450903 LOC106396174 LOC102623602
Function* pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 3
bra00670 One carbon pool by folate 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107821580 107774565 101251033 102599266 100788616 103866882 100241999 7488898 107911582 107941751 106450903 106396174 102623602
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