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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101251033   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 sly-r.6   101251033   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 sot-r.1   102599266   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 nta-r.1   107774565   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 nta-r.1   107821580   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 gma-u.5   100788616   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 bra-r.6   103866882   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 vvi-u.5   100241999   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 ppo-u.5   7488898   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 
 ghi-r.1   107941751   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 ghi-r.1   107911582   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 bna-r.1   106450903   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 bna-r.1   106396174   pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like 
 cit-r.1   102623602   pentatricopeptide repeat-containing protein At2g45350, chloroplastic 

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Top 50 coexpressed genes to 101251033 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101251033 (sly-u.5 coexpression data)

CoexMap"101251033"


slyLOC101251033 | Entrez gene ID : 101251033      
Species sly sot nta gma bra vvi ppo ghi bna cit bdi osa tae zma sbi cre mtr ath hvu
Paralog 2 1 2 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004229808.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  chlo 2,  nucl 2,  cysk_plas 1,  cysk 1,  mito_plas 1  (predict for XP_004229808.1)
Subcellular
localization
TargetP
other 3  (predict for XP_004229808.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101251033
sly-r.6
for
101251033
sot-r.1
for
102599266
nta-r.1
for
107774565
nta-r.1
for
107821580
gma-u.5
for
100788616
bra-r.6
for
103866882
vvi-u.5
for
100241999
ppo-u.5
for
7488898
ghi-r.1
for
107941751
ghi-r.1
for
107911582
bna-r.1
for
106450903
bna-r.1
for
106396174
cit-r.1
for
102623602


Ortholog ID: 13426
Species sly sot nta nta gma bra vvi ppo ghi ghi bna bna cit
Symbol LOC101251033 LOC102599266 LOC107774565 LOC107821580 LOC100788616 LOC103866882 LOC100241999 LOC7488898 LOC107941751 LOC107911582 LOC106450903 LOC106396174 LOC102623602
Function* pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like pentatricopeptide repeat-containing protein At2g45350, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 3
bra00670 One carbon pool by folate 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101251033 102599266 107774565 107821580 100788616 103866882 100241999 7488898 107941751 107911582 106450903 106396174 102623602
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