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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107822331   uncharacterized LOC107822331 
 nta-r.1   107790313   uncharacterized LOC107790313 
 nta-r.1   107816999   uncharacterized LOC107816999 
 sly-u.5   101261914   uncharacterized LOC101261914 
 sly-u.5   101248195   uncharacterized LOC101248195 
 sly-u.5   101248481   uncharacterized LOC101248481 
 sot-r.1   102588214   probable rhamnogalacturonate lyase B 
 sot-r.1   102584605   probable rhamnogalacturonate lyase B 
 ath-u.5   AT2G22620   Rhamnogalacturonate lyase family protein 
 gma-u.5   100815677   probable rhamnogalacturonate lyase B 
 gma-u.5   100814721   probable rhamnogalacturonate lyase B 
 gma-u.5   100786488   probable rhamnogalacturonate lyase B 
 bra-r.6   103864654   rhamnogalacturonate lyase 
 bra-r.6   103837873   probable rhamnogalacturonate lyase B 
 bra-r.6   103871769   rhamnogalacturonate lyase B 
 vvi-u.5   100247189   probable rhamnogalacturonate lyase B 
 ppo-u.5   7464763   probable rhamnogalacturonate lyase B 
 ppo-u.5   7467220   probable rhamnogalacturonate lyase B 
 ppo-u.5   7491976   rhamnogalacturonate lyase B 
 mtr-u.5   11422528   probable rhamnogalacturonate lyase B 
 mtr-u.5   11405460   rhamnogalacturonate lyase B 
 mtr-u.5   11444270   rhamnogalacturonate lyase 
 ghi-r.1   107957840   rhamnogalacturonate lyase 
 ghi-r.1   107905134   probable rhamnogalacturonate lyase B 
 bna-r.1   106415698   probable rhamnogalacturonate lyase B 
 bna-r.1   106441989   rhamnogalacturonate lyase 
 cit-r.1   102607519   probable rhamnogalacturonate lyase B 
 cit-r.1   102621817   probable rhamnogalacturonate lyase B 
 osa-u.5   4346275   uncharacterized LOC4346275 
 osa-u.5   4346274   uncharacterized LOC4346274 
 osa-u.5   4349697   uncharacterized LOC4349697 
 zma-u.5   100286025   lyase 
 zma-u.5   103654318   rhamnogalacturonate lyase B 
 zma-u.5   103643208   probable rhamnogalacturonate lyase B 
 hvu-r.1   123407127   probable rhamnogalacturonate lyase B 
 sbi-r.1   8057831   probable rhamnogalacturonate lyase B 
 bdi-r.1   100833182   probable rhamnogalacturonate lyase B 

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Top 50 coexpressed genes to 107822331 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107822331 (nta-r.1 coexpression data)

CoexMap"107822331"


ntaLOC107822331 | Entrez gene ID : 107822331      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma hvu sbi bdi tae cre
Paralog 3 3 2 1 3 3 1 3 3 2 2 2 3 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1425 genes)  IEA  
GO CC
GO MF
GO:0030246 [list] [network] carbohydrate binding  (373 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (17240 genes)  IEA  
Protein XP_075082378.1 [sequence] [blastp]
XP_075082379.1 [sequence] [blastp]
XP_075082380.1 [sequence] [blastp]
XP_075082381.1 [sequence] [blastp]
XP_075082382.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  mito 2,  nucl 1  (predict for XP_075082378.1)
chlo 3,  cyto 2,  extr 1,  vacu 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_075082379.1)
cyto 7,  chlo 1,  nucl 1,  extr 1,  golg 1  (predict for XP_075082380.1)
cyto 4,  chlo 3,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_075082381.1)
cyto 9  (predict for XP_075082382.1)
Subcellular
localization
TargetP
scret 6,  mito 5  (predict for XP_075082378.1)
other 6,  scret 5  (predict for XP_075082379.1)
other 7,  scret 4  (predict for XP_075082380.1)
scret 6,  mito 5  (predict for XP_075082381.1)
other 8,  scret 3  (predict for XP_075082382.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107822331
nta-r.1
for
107790313
nta-r.1
for
107816999
sly-u.5
for
101261914
sly-u.5
for
101248195
sly-u.5
for
101248481
sot-r.1
for
102588214
sot-r.1
for
102584605
ath-u.5
for
AT2G22620
gma-u.5
for
100815677
gma-u.5
for
100814721
gma-u.5
for
100786488
bra-r.6
for
103864654
bra-r.6
for
103837873
bra-r.6
for
103871769
vvi-u.5
for
100247189
ppo-u.5
for
7464763
ppo-u.5
for
7467220
ppo-u.5
for
7491976
mtr-u.5
for
11422528
mtr-u.5
for
11405460
mtr-u.5
for
11444270
ghi-r.1
for
107957840
ghi-r.1
for
107905134
bna-r.1
for
106415698
bna-r.1
for
106441989
cit-r.1
for
102607519
cit-r.1
for
102621817
osa-u.5
for
4346275
osa-u.5
for
4346274
osa-u.5
for
4349697
zma-u.5
for
100286025
zma-u.5
for
103654318
zma-u.5
for
103643208
hvu-r.1
for
123407127
sbi-r.1
for
8057831
bdi-r.1
for
100833182


Ortholog ID: 639
Species nta nta nta sly sly sly sot sot sot ath gma gma gma bra bra bra vvi ppo ppo ppo mtr mtr mtr ghi ghi bna bna bna cit osa osa osa zma zma zma hvu bdi bdi
Symbol LOC107816999 LOC107814403 LOC107831685 LOC101261914 LOC101250582 LOC101260634 LOC102588214 LOC102584605 LOC102595358 AT1G09910 LOC100815677 LOC100786488 LOC100814185 LOC103864654 LOC103871769 LOC103871768 LOC100247189 LOC7464763 LOC7491976 LOC7467217 LOC11422528 LOC11444270 LOC11426848 LOC107957840 LOC107905134 LOC106415698 LOC106441989 LOC106391090 LOC102631222 LOC4346275 LOC4346274 LOC4349697 LOC100286025 LOC103654318 LOC103643208 LOC123407127 LOC100833182 LOC100846621
Function* uncharacterized LOC107816999 uncharacterized LOC107814403 uncharacterized LOC107831685 uncharacterized LOC101261914 uncharacterized LOC101250582 uncharacterized LOC101260634 probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase-like Rhamnogalacturonate lyase family protein probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase rhamnogalacturonate lyase rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase rhamnogalacturonate lyase rhamnogalacturonate lyase probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase rhamnogalacturonate lyase-like rhamnogalacturonate lyase B uncharacterized LOC4346275 uncharacterized LOC4346274 uncharacterized LOC4349697 lyase rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 3
sot00071 Fatty acid degradation 3
sot01212 Fatty acid metabolism 3
sot04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00071 Fatty acid degradation 2
bra01212 Fatty acid metabolism 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
ppo04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna03430 Mismatch repair 4
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma02010 ABC transporters 2
zma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107816999 107814403 107831685 101261914 101250582 101260634 102588214 102584605 102595358 837523 100815677 100786488 100814185 103864654 103871769 103871768 100247189 7464763 7491976 7467217 11422528 11444270 11426848 107957840 107905134 106415698 106441989 106391090 102631222 4346275 4346274 4349697 100286025 103654318 103643208 123407127 100833182 100846621
The preparation time of this page was 4.1 [sec].