ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-e.1	4331370	AP-2 complex subunit alpha-2
osa-u.5	4331370	AP-2 complex subunit alpha-2
osa-r.6	4331370	AP-2 complex subunit alpha-2
osa-m.8	4331370	AP-2 complex subunit alpha-2
tae-r.2	123106202	AP-2 complex subunit alpha-1
tae-r.2	123094065	AP-2 complex subunit alpha-1
hvu-r.1	123450031	AP-2 complex subunit alpha-1-like
bdi-r.1	100829540	AP-2 complex subunit alpha-2
zma-u.5	100280063	uncharacterized LOC100280063
zma-u.5	100384187	AP-2 complex subunit alpha-2
sbi-r.1	8078010	AP-2 complex subunit alpha-2
ath-u.5	alpha-ADR	alpha-adaptin
ath-u.5	AT5G22780	Adaptor protein complex AP-2, alpha subunit
gma-u.5	100798273	AP-2 complex subunit alpha-1
gma-u.5	100793930	AP-2 complex subunit alpha-1
sly-u.5	101246147	AP-2 complex subunit alpha-1-like
sly-u.5	101245025	AP-2 complex subunit alpha-1-like
bra-r.6	103873020	AP-2 complex subunit alpha-2
bra-r.6	103845528	AP-2 complex subunit alpha-1
vvi-u.5	100241344	AP-2 complex subunit alpha-1
ppo-u.5	7474927	AP-2 complex subunit alpha-1
ppo-u.5	18098001	AP-2 complex subunit alpha-1
mtr-u.5	25487490	AP-2 complex subunit alpha-1
ghi-r.1	107932510	AP-2 complex subunit alpha-1
ghi-r.1	107931934	AP-2 complex subunit alpha-1
ghi-r.1	107891639	AP-2 complex subunit alpha-1
bna-r.1	106427863	AP-2 complex subunit alpha-2
bna-r.1	106376428	AP-2 complex subunit alpha-2
bna-r.1	106371638	AP-2 complex subunit alpha-1
sot-r.1	102588472	AP-2 complex subunit alpha-1-like
sot-r.1	102597845	AP-2 complex subunit alpha-1-like
cit-r.1	102613876	AP-2 complex subunit alpha-1-like
nta-r.1	107826292	AP-2 complex subunit alpha-1
nta-r.1	107792655	AP-2 complex subunit alpha-1
nta-r.1	107775474	AP-2 complex subunit alpha-1
cre-r.1	CHLRE_12g488850v5	uncharacterized protein

Top 50 coexpressed genes to 4331370 (osa-e.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4331370 (osa-e.1 coexpression data)

CoexMap"4331370"

[Cytoscape]

Annotation

functional annotation

KEGG

osa04144 [list] [network] Endocytosis (155 genes)

GO BP

GO:0072583 [list] [network] clathrin-dependent endocytosis	(25 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(271 genes)	IEA

GO CC

GO:0030122 [list] [network] AP-2 adaptor complex	(2 genes)	IEA
GO:0030117 [list] [network] membrane coat	(71 genes)	IEA

GO MF

GO:0035615 [list] [network] clathrin adaptor activity

(6 genes)

IEA

Protein

XP_015631820.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 9, chlo 1

(predict for XP_015631820.1)

Subcellular
localization
TargetP

other 5

(predict for XP_015631820.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4331370	osa-u.5 for 4331370	osa-r.6 for 4331370	osa-m.8 for 4331370	tae-r.2 for 123106202	tae-r.2 for 123094065	hvu-r.1 for 123450031	bdi-r.1 for 100829540	zma-u.5 for 100280063	zma-u.5 for 100384187	sbi-r.1 for 8078010	ath-u.5 for alpha-ADR	ath-u.5 for AT5G22780	gma-u.5 for 100798273	gma-u.5 for 100793930	sly-u.5 for 101246147	sly-u.5 for 101245025	bra-r.6 for 103873020	bra-r.6 for 103845528	vvi-u.5 for 100241344	ppo-u.5 for 7474927	ppo-u.5 for 18098001	mtr-u.5 for 25487490	ghi-r.1 for 107932510	ghi-r.1 for 107931934	ghi-r.1 for 107891639	bna-r.1 for 106427863	bna-r.1 for 106376428	bna-r.1 for 106371638	sot-r.1 for 102588472	sot-r.1 for 102597845	cit-r.1 for 102613876	nta-r.1 for 107826292	nta-r.1 for 107792655	nta-r.1 for 107775474	cre-r.1 for CHLRE_12g488850v5

Ortholog

Ortholog ID: 5838

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

AP-2 complex subunit alpha-2

AP-2 complex subunit alpha-1

AP-2 complex subunit alpha-1-like

AP-2 complex subunit alpha-2

uncharacterized LOC100280063

AP-2 complex subunit alpha-2

alpha-adaptin

Adaptor protein complex AP-2, alpha subunit

AP-2 complex subunit alpha-1

AP-2 complex subunit alpha-1-like

AP-2 complex subunit alpha-2

AP-2 complex subunit alpha-1

AP-2 complex subunit alpha-2

AP-2 complex subunit alpha-1

AP-2 complex subunit alpha-1-like

AP-2 complex subunit alpha-1

AP-2 complex subunit alpha-1-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3
osa04141	Protein processing in endoplasmic reticulum	2
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	6
tae04144	Endocytosis	5
tae05100	Bacterial invasion of epithelial cells	3
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	9
tae04142	Lysosome	8
tae05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	4
hvu04142	Lysosome	2
hvu05100	Bacterial invasion of epithelial cells	2
hvu00562	Inositol phosphate metabolism	2
hvu04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	6
bdi05100	Bacterial invasion of epithelial cells	3
bdi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	5
zma04142	Lysosome	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	5
zma04144	Endocytosis	4
zma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3
sbi04142	Lysosome	3
sbi04141	Protein processing in endoplasmic reticulum	2
sbi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	6
ath05100	Bacterial invasion of epithelial cells	4
ath04142	Lysosome	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	6
ath05100	Bacterial invasion of epithelial cells	3
ath04142	Lysosome	2
ath02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	7
gma05100	Bacterial invasion of epithelial cells	3
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00020	Citrate cycle (TCA cycle)	5
sly01200	Carbon metabolism	5
sly00640	Propanoate metabolism	3
sly01210	2-Oxocarboxylic acid metabolism	3
sly00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	5
sly05100	Bacterial invasion of epithelial cells	4
sly04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3
bra04144	Endocytosis	2
bra03015	mRNA surveillance pathway	2
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	8
bra04142	Lysosome	5
bra05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	4
vvi04142	Lysosome	3
vvi03013	Nucleocytoplasmic transport	2
vvi04141	Protein processing in endoplasmic reticulum	2
vvi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	6
ppo04142	Lysosome	5
ppo05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	5
ppo04144	Endocytosis	5
ppo05100	Bacterial invasion of epithelial cells	3
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	3
mtr04142	Lysosome	3
mtr03013	Nucleocytoplasmic transport	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi03013	Nucleocytoplasmic transport	2
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi03013	Nucleocytoplasmic transport	2
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	5
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	6
sot04142	Lysosome	4
sot05100	Bacterial invasion of epithelial cells	4
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	6
sot04144	Endocytosis	6
sot04141	Protein processing in endoplasmic reticulum	4
sot05100	Bacterial invasion of epithelial cells	3
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit04144	Endocytosis	3
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	4
cre04142	Lysosome	4
cre04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

4331370

123106202

123094065

123450031

100829540

100280063

100384187

8078010

832340

832341

100798273

100793930

101246147

101245025

103873020

103845528

100241344

7474927

18098001

25487490

107932510

107931934

107889041

106427863

106376428

106371638

102588472

102597845

102613876

107826292

107792655

107768030

5716671

The preparation time of this page was 0.1 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	1	1	2	1	2	2	2	2	1	2	1	3	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4331370 (osa-e.1 coexpression data)

Top 50 enrichment test to 4331370 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**