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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1   4334749   small ribosomal subunit protein bS6c 
 osa-u.5   4334749   small ribosomal subunit protein bS6c 
 osa-r.6   4334749   small ribosomal subunit protein bS6c 
 osa-m.8   4334749   small ribosomal subunit protein bS6c 
 tae-r.2   123087671   30S ribosomal protein S6 alpha, chloroplastic 
 tae-r.2   123114269   30S ribosomal protein S6 alpha, chloroplastic 
 tae-r.2   123123753   30S ribosomal protein S6 alpha, chloroplastic 
 hvu-r.1   123395042   30S ribosomal protein S6 alpha, chloroplastic 
 bdi-r.1   100828463   30S ribosomal protein S6 alpha, chloroplastic 
 zma-u.5   100382451   30S ribosomal protein S6, chloroplastic-like 
 sbi-r.1   8060897   30S ribosomal protein S6 alpha, chloroplastic 
 ath-u.5   AT1G64510   Translation elongation factor EF1B/ribosomal protein S6 family protein 
 gma-u.5   100500072   uncharacterized LOC100500072 
 gma-u.5   100305490   uncharacterized LOC100305490 
 sly-u.5   101249844   small ribosomal subunit protein bS6c alpha 
 bra-r.6   103849698   30S ribosomal protein S6 alpha, chloroplastic 
 bra-r.6   103838196   30S ribosomal protein S6 alpha, chloroplastic 
 vvi-u.5   100244408   small ribosomal subunit protein bS6c 
 ppo-u.5   7467065   30S ribosomal protein S6 alpha, chloroplastic 
 mtr-u.5   25502223   30S ribosomal protein S6 alpha, chloroplastic 
 ghi-r.1   107947179   30S ribosomal protein S6 alpha, chloroplastic 
 ghi-r.1   107947142   30S ribosomal protein S6 alpha, chloroplastic 
 bna-r.1   125577818   30S ribosomal protein S6 alpha, chloroplastic-like 
 bna-r.1   106366463   30S ribosomal protein S6 alpha, chloroplastic 
 bna-r.1   106363786   30S ribosomal protein S6 alpha, chloroplastic 
 sot-r.1   102603924   30S ribosomal protein S6 alpha, chloroplastic 
 cit-r.1   102624497   30S ribosomal protein S6 alpha, chloroplastic 
 nta-r.1   107826535   small ribosomal subunit protein bS6c alpha 
 nta-r.1   107813387   small ribosomal subunit protein bS6c alpha-like 
 nta-r.1   107769782   small ribosomal subunit protein bS6c 
 cre-r.1   CHLRE_12g520600v5   uncharacterized protein 

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Top 50 coexpressed genes to 4334749 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334749 (osa-e.1 coexpression data)

CoexMap"4334749"


osaLOC4334749 | Entrez gene ID : 4334749      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 1 1 1 1 1 2 1 2 1 1 1 2 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03010 [list] [network] Ribosome (386 genes)
GO BP
GO:0006412 [list] [network] translation  (521 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (360 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (10 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (352 genes)  IEA  
Protein XP_015629708.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_015629708.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_015629708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-e.1
for
4334749
osa-u.5
for
4334749
osa-r.6
for
4334749
osa-m.8
for
4334749
tae-r.2
for
123087671
tae-r.2
for
123114269
tae-r.2
for
123123753
hvu-r.1
for
123395042
bdi-r.1
for
100828463
zma-u.5
for
100382451
sbi-r.1
for
8060897
ath-u.5
for
AT1G64510
gma-u.5
for
100500072
gma-u.5
for
100305490
sly-u.5
for
101249844
bra-r.6
for
103849698
bra-r.6
for
103838196
vvi-u.5
for
100244408
ppo-u.5
for
7467065
mtr-u.5
for
25502223
ghi-r.1
for
107947179
ghi-r.1
for
107947142
bna-r.1
for
125577818
bna-r.1
for
106366463
bna-r.1
for
106363786
sot-r.1
for
102603924
cit-r.1
for
102624497
nta-r.1
for
107826535
nta-r.1
for
107813387
nta-r.1
for
107769782
cre-r.1
for
CHLRE_12g520600v5


Ortholog ID: 7846
Species osa tae tae tae hvu bdi zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC4334749 LOC123087671 LOC123114269 LOC123123753 LOC123395042 LOC100828463 LOC100382451 LOC8060897 AT1G64510 LOC100500072 LOC100305490 LOC101249844 LOC103849698 LOC103838196 LOC100244408 LOC7467065 LOC25502223 LOC107947179 LOC107947142 LOC125577818 LOC106363786 LOC106349373 LOC102603924 LOC102624497 LOC107826535 LOC107813387 LOC107768964 CHLRE_12g520600v5
Function* small ribosomal subunit protein bS6c 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6, chloroplastic-like 30S ribosomal protein S6 alpha, chloroplastic Translation elongation factor EF1B/ribosomal protein S6 family protein uncharacterized LOC100500072 uncharacterized LOC100305490 small ribosomal subunit protein bS6c alpha 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic small ribosomal subunit protein bS6c 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic-like 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic small ribosomal subunit protein bS6c alpha small ribosomal subunit protein bS6c alpha-like small ribosomal subunit protein bS6c uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr00860 Porphyrin metabolism 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00790 Folate biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00790 Folate biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00790 Folate biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334749 123087671 123114269 123123753 123395042 100828463 100382451 8060897 842759 100500072 100305490 101249844 103849698 103838196 100244408 7467065 25502223 107947179 107947142 125577818 106363786 106349373 102603924 102624497 107826535 107813387 107768964 5722587
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