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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467065   30S ribosomal protein S6 alpha, chloroplastic 
 ppo-r.4   7467065   30S ribosomal protein S6 alpha, chloroplastic 
 ppo-m.4   7467065   30S ribosomal protein S6 alpha, chloroplastic 
 gma-u.5   100500072   uncharacterized LOC100500072 
 gma-u.5   100305490   uncharacterized LOC100305490 
 mtr-u.5   25502223   30S ribosomal protein S6 alpha, chloroplastic 
 ath-u.5   AT1G64510   Translation elongation factor EF1B/ribosomal protein S6 family protein 
 vvi-u.5   100244408   small ribosomal subunit protein bS6c 
 sly-u.5   101249844   small ribosomal subunit protein bS6c alpha 
 osa-u.5   4334749   small ribosomal subunit protein bS6c 
 zma-u.5   100382451   30S ribosomal protein S6, chloroplastic-like 

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Top 50 coexpressed genes to 7467065 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467065 (ppo-u.5 coexpression data)

CoexMap"7467065"


ppoLOC7467065 | Entrez gene ID : 7467065    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (15 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002297965.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_002297965.4)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002297965.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467065

.
ppo-r.4
for
7467065

.
ppo-m.4
for
7467065

.
gma-u.5
for
100500072

.
gma-u.5
for
100305490

.
mtr-u.5
for
25502223

.
ath-u.5
for
AT1G64510

.
vvi-u.5
for
100244408

.
sly-u.5
for
101249844

.
osa-u.5
for
4334749

.
zma-u.5
for
100382451

.


Ortholog ID: 7846
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G64510 LOC100305490 LOC100500072 LOC101249844 LOC4334749 LOC100382451 LOC103849698 LOC103838196 LOC100244408 LOC7467065 LOC25502223 LOC123114269 LOC123123753 LOC123395042 LOC107947142 LOC107947179 LOC106349373 LOC125577818 CHLRE_12g520600v5 LOC8060897 LOC102603924 LOC102624497 LOC100828463 LOC107813387 LOC107826535
Function* Translation elongation factor EF1B/ribosomal protein S6 family protein uncharacterized LOC100305490 uncharacterized LOC100500072 small ribosomal subunit protein bS6c alpha small ribosomal subunit protein bS6c 30S ribosomal protein S6, chloroplastic-like 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic small ribosomal subunit protein bS6c 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic-like uncharacterized protein 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic 30S ribosomal protein S6 alpha, chloroplastic small ribosomal subunit protein bS6c alpha-like small ribosomal subunit protein bS6c alpha
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr00860 Porphyrin metabolism 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00790 Folate biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00790 Folate biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842759 100305490 100500072 101249844 4334749 100382451 103849698 103838196 100244408 7467065 25502223 123114269 123123753 123395042 107947142 107947179 106349373 125577818 5722587 8060897 102603924 102624497 100828463 107813387 107826535
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