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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-u.5   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-r.7   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.9   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-e.2   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.bio   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.lig   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.str   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.tis   AT2G39725   LYR family of Fe/S cluster biogenesis protein 
 bra-r.6   103865739   succinate dehydrogenase assembly factor 1, mitochondrial 
 bna-r.1   106447460   succinate dehydrogenase assembly factor 1, mitochondrial 
 bna-r.1   106381752   succinate dehydrogenase assembly factor 1, mitochondrial 
 ghi-r.1   107918589   succinate dehydrogenase assembly factor 1, mitochondrial 
 ghi-r.1   107895066   succinate dehydrogenase assembly factor 1, mitochondrial 
 cit-r.1   102622272   uncharacterized LOC102622272 
 gma-u.5   100791084   succinate dehydrogenase assembly factor 1 homolog, mitochondrial-like 
 ppo-u.5   112327190   succinate dehydrogenase assembly factor 1, mitochondrial 
 mtr-u.5   11427456   succinate dehydrogenase assembly factor 1, mitochondrial 
 sly-u.5   101265269   succinate dehydrogenase assembly factor 1, mitochondrial 
 sot-r.1   102600461   succinate dehydrogenase assembly factor 1, mitochondrial 
 osa-u.5   4345159   succinate dehydrogenase assembly factor 1, mitochondrial 
 zma-u.5   113174990   uncharacterized LOC113174990 
 zma-u.5   100280711   complex 1 protein containing protein 
 zma-u.5   100280884   complex 1 protein containing protein 
 tae-r.2   123100313   succinate dehydrogenase assembly factor 1, mitochondrial 
 tae-r.2   123089244   succinate dehydrogenase assembly factor 1, mitochondrial 
 tae-r.2   123084752   succinate dehydrogenase assembly factor 1, mitochondrial 
 hvu-r.1   123447086   succinate dehydrogenase assembly factor 1, mitochondrial 
 sbi-r.1   8058772   succinate dehydrogenase assembly factor 1, mitochondrial 
 bdi-r.1   100841752   succinate dehydrogenase assembly factor 1, mitochondrial 

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Top 50 coexpressed genes to AT2G39725 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G39725 (ath-m.4.hor coexpression data)

CoexMap"818557"


athAT2G39725 | Entrez gene ID : 818557      
Species ath bra bna ghi cit gma ppo mtr sly sot osa zma tae hvu sbi bdi cre vvi nta
Paralog 9 1 2 2 1 1 1 1 1 1 1 3 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034553 [list] [network] mitochondrial respiratory chain complex II assembly  (2 genes)  IGI IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565912.1 [sequence] [blastp]
NP_973640.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto_nucl 3,  chlo_mito 3  (predict for NP_565912.1)
mito 4,  cyto_nucl 3,  chlo_mito 3  (predict for NP_973640.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_565912.1)
mito 8  (predict for NP_973640.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT2G39725
ath-u.5
for
AT2G39725
ath-r.7
for
AT2G39725
ath-m.9
for
AT2G39725
ath-e.2
for
AT2G39725
ath-m.4.bio
for
AT2G39725
ath-m.4.lig
for
AT2G39725
ath-m.4.str
for
AT2G39725
ath-m.4.tis
for
AT2G39725
bra-r.6
for
103865739
bna-r.1
for
106447460
bna-r.1
for
106381752
ghi-r.1
for
107918589
ghi-r.1
for
107895066
cit-r.1
for
102622272
gma-u.5
for
100791084
ppo-u.5
for
112327190
mtr-u.5
for
11427456
sly-u.5
for
101265269
sot-r.1
for
102600461
osa-u.5
for
4345159
zma-u.5
for
113174990
zma-u.5
for
100280711
zma-u.5
for
100280884
tae-r.2
for
123100313
tae-r.2
for
123089244
tae-r.2
for
123084752
hvu-r.1
for
123447086
sbi-r.1
for
8058772
bdi-r.1
for
100841752


Ortholog ID: 10707
Species ath bra bna bna ghi ghi cit gma ppo mtr sly sot osa zma zma zma tae tae tae hvu sbi bdi
Symbol AT2G39725 LOC103865739 LOC106447460 LOC106381752 LOC107918589 LOC107895066 LOC102622272 LOC100791084 LOC112327190 LOC11427456 LOC101265269 LOC102600461 LOC4345159 LOC100280711 LOC100280884 LOC103638067 LOC123100313 LOC123089244 LOC123084752 LOC123447086 LOC8058772 LOC100841752
Function* LYR family of Fe/S cluster biogenesis protein succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial uncharacterized LOC102622272 succinate dehydrogenase assembly factor 1 homolog, mitochondrial-like succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial complex 1 protein containing protein complex 1 protein containing protein succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial succinate dehydrogenase assembly factor 1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00190 Oxidative phosphorylation 2
ghi04142 Lysosome 2
ghi04145 Phagosome 2
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04142 Lysosome 2
ghi04145 Phagosome 2
ghi04146 Peroxisome 2
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00510 N-Glycan biosynthesis 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03083 Polycomb repressive complex 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818557 103865739 106447460 106381752 107918589 107895066 102622272 100791084 112327190 11427456 101265269 102600461 4345159 100280711 100280884 103638067 123100313 123089244 123084752 123447086 8058772 100841752
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