Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT3G54790   ARM repeat superfamily protein 
 ath-u.5   AT3G54790   ARM repeat superfamily protein 
 ath-r.7   AT3G54790   ARM repeat superfamily protein 
 ath-m.9   AT3G54790   ARM repeat superfamily protein 
 ath-e.2   AT3G54790   ARM repeat superfamily protein 
 ath-m.4.bio   AT3G54790   ARM repeat superfamily protein 
 ath-m.4.lig   AT3G54790   ARM repeat superfamily protein 
 ath-m.4.str   AT3G54790   ARM repeat superfamily protein 
 ath-m.4.tis   AT3G54790   ARM repeat superfamily protein 
 bra-r.6   103841380   U-box domain-containing protein 3 
 bna-r.1   106445426   U-box domain-containing protein 3-like 
 bna-r.1   106411704   U-box domain-containing protein 3 
 bna-r.1   106411575   U-box domain-containing protein 3-like 
 ghi-r.1   107958645   U-box domain-containing protein 3 
 ghi-r.1   107955431   U-box domain-containing protein 3 
 ghi-r.1   107954637   U-box domain-containing protein 3 
 cit-r.1   102612575   U-box domain-containing protein 3 
 gma-u.5   100782215   U-box domain-containing protein 3 
 gma-u.5   100800949   U-box domain and armadillo/beta-catenin repeat-containing protein 
 gma-u.5   100804684   U-box domain-containing protein 3 
 vvi-u.5   100266964   U-box domain-containing protein 3 
 ppo-u.5   7471963   U-box domain-containing protein 3 
 ppo-u.5   7476923   U-box domain-containing protein 3 
 mtr-u.5   25499269   U-box domain-containing protein 3 
 mtr-u.5   25484253   U-box domain-containing protein 3 
 sly-u.5   101260859   U-box domain-containing protein 3 
 sot-r.1   102596908   U-box domain-containing protein 3 
 nta-r.1   107779205   U-box domain-containing protein 3-like 
 nta-r.1   107790889   U-box domain-containing protein 3-like 

close


Top 50 coexpressed genes to AT3G54790 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G54790 (ath-m.4.hor coexpression data)

CoexMap"824644"


athAT3G54790 | Entrez gene ID : 824644      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta sbi cre tae zma osa bdi hvu
Paralog 9 1 3 3 1 3 1 2 2 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IEA  
Protein NP_001078286.1 [sequence] [blastp]
NP_001325795.1 [sequence] [blastp]
NP_191039.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for NP_001078286.1)
nucl 4,  chlo 3,  chlo_mito 3,  mito 2,  cysk_nucl 2  (predict for NP_001325795.1)
nucl 4,  chlo 3,  chlo_mito 3,  mito 2,  cysk_nucl 2  (predict for NP_191039.2)
Subcellular
localization
TargetP
other 5,  scret 4  (predict for NP_001078286.1)
mito 3,  scret 3,  other 3  (predict for NP_001325795.1)
mito 3,  scret 3,  other 3  (predict for NP_191039.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT3G54790
ath-u.5
for
AT3G54790
ath-r.7
for
AT3G54790
ath-m.9
for
AT3G54790
ath-e.2
for
AT3G54790
ath-m.4.bio
for
AT3G54790
ath-m.4.lig
for
AT3G54790
ath-m.4.str
for
AT3G54790
ath-m.4.tis
for
AT3G54790
bra-r.6
for
103841380
bna-r.1
for
106445426
bna-r.1
for
106411704
bna-r.1
for
106411575
ghi-r.1
for
107958645
ghi-r.1
for
107955431
ghi-r.1
for
107954637
cit-r.1
for
102612575
gma-u.5
for
100782215
gma-u.5
for
100800949
gma-u.5
for
100804684
vvi-u.5
for
100266964
ppo-u.5
for
7471963
ppo-u.5
for
7476923
mtr-u.5
for
25499269
mtr-u.5
for
25484253
sly-u.5
for
101260859
sot-r.1
for
102596908
nta-r.1
for
107779205
nta-r.1
for
107790889


Ortholog ID: 8984
Species ath bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta
Symbol AT3G54790 LOC103841380 LOC106445426 LOC106411575 LOC125608091 LOC107958645 LOC107923879 LOC107922821 LOC102612575 LOC100782215 LOC100800949 LOC100804684 LOC100266964 LOC7471963 LOC7476923 LOC25499269 LOC25484253 LOC101260859 LOC102596908 LOC107779205 LOC107790889
Function* ARM repeat superfamily protein U-box domain-containing protein 3 U-box domain-containing protein 3-like U-box domain-containing protein 3-like U-box domain-containing protein 3-like U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain and armadillo/beta-catenin repeat-containing protein U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3-like U-box domain-containing protein 3-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04145 Phagosome 2
mtr04517 IgSF CAM signaling 2
mtr04814 Motor proteins 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824644 103841380 106445426 106411575 125608091 107958645 107923879 107922821 102612575 100782215 100800949 100804684 100266964 7471963 7476923 25499269 25484253 101260859 102596908 107779205 107790889
The preparation time of this page was 0.2 [sec].