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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   ABCD1   peroxisomal ABC transporter 1 
 ath-u.5   ABCD1   peroxisomal ABC transporter 1 
 ath-r.7   ABCD1   peroxisomal ABC transporter 1 
 ath-m.9   ABCD1   peroxisomal ABC transporter 1 
 ath-e.2   ABCD1   peroxisomal ABC transporter 1 
 ath-m.4.bio   ABCD1   peroxisomal ABC transporter 1 
 ath-m.4.lig   ABCD1   peroxisomal ABC transporter 1 
 ath-m.4.str   ABCD1   peroxisomal ABC transporter 1 
 ath-m.4.tis   ABCD1   peroxisomal ABC transporter 1 
 bna-r.1   106410587   ABC transporter D family member 1 
 bna-r.1   106361371   ABC transporter D family member 1 
 bna-r.1   106382600   ABC transporter D family member 1 
 ghi-r.1   107925489   ABC transporter D family member 1 
 ghi-r.1   107950463   ABC transporter D family member 1 
 ghi-r.1   107945455   ABC transporter D family member 1 
 cit-r.1   102617705   ABC transporter D family member 1 
 gma-u.5   100786592   ABC transporter D family member 1 
 gma-u.5   100813765   ABC transporter D family member 1 
 gma-u.5   100796571   ABC transporter D family member 1 
 ppo-u.5   7471510   ABC transporter D family member 1 
 ppo-u.5   18100943   ABC transporter D family member 1 
 mtr-u.5   11417619   ABC transporter D family member 1 
 sly-u.5   ABCD1   ABC transporter D family member 1 
 sot-r.1   102587630   ABC transporter D family member 1 
 nta-r.1   107801433   ABC transporter D family member 1 
 nta-r.1   107770907   ABC transporter D family member 1 
 osa-u.5   4337574   ABC transporter D family member 1 
 osa-u.5   4324471   ABC transporter D family member 1 
 zma-u.5   100383831   uncharacterized LOC100383831 
 zma-u.5   100502226   uncharacterized LOC100502226 
 tae-r.2   123070454   ABC transporter D family member 1 
 tae-r.2   123063605   ABC transporter D family member 1 
 tae-r.2   123080924   ABC transporter D family member 1 
 hvu-r.1   123437727   ABC transporter D family member 1-like 
 hvu-r.1   123445636   ABC transporter D family member 1-like 
 hvu-r.1   123431289   ABC transporter D family member 1-like 
 sbi-r.1   8066604   ABC transporter D family member 1 
 sbi-r.1   8074123   ABC transporter D family member 1 
 bdi-r.1   100823561   ABC transporter D family member 1 
 bdi-r.1   100828676   ABC transporter D family member 1 
 cre-r.1   CHLRE_15g637761v5   uncharacterized protein 

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Top 50 coexpressed genes to ABCD1 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ABCD1 (ath-m.4.hor coexpression data)

CoexMap"830144"


athABCD1 | Entrez gene ID : 830144      
Species ath bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi bra
Paralog 9 3 3 1 3 2 1 1 1 2 2 2 3 3 2 2 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath02010 [list] [network] ABC transporters (68 genes)
ath04146 [list] [network] Peroxisome (90 genes)
GO BP
GO:0015916 [list] [network] fatty-acyl-CoA transport  (1 genes)  IMP  
GO:0006744 [list] [network] ubiquinone biosynthetic process  (11 genes)  IMP  
GO:0006635 [list] [network] fatty acid beta-oxidation  (24 genes)  IMP  
GO:0010030 [list] [network] positive regulation of seed germination  (25 genes)  IMP  
GO:0016042 [list] [network] lipid catabolic process  (78 genes)  IMP  
GO CC
GO:0046861 [list] [network] glyoxysomal membrane  (1 genes)  IDA  
GO:0005777 [list] [network] peroxisome  (313 genes)  IDA  
GO MF
GO:0042626 [list] [network] ATPase-coupled transmembrane transporter activity  (192 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001190972.1 [sequence] [blastp]
NP_001190973.1 [sequence] [blastp]
NP_001328232.1 [sequence] [blastp]
NP_568072.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001190972.1)
plas 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001190973.1)
plas 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001328232.1)
plas 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_568072.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001190972.1)
mito 9  (predict for NP_001190973.1)
mito 9  (predict for NP_001328232.1)
mito 9  (predict for NP_568072.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
ABCD1
ath-u.5
for
ABCD1
ath-r.7
for
ABCD1
ath-m.9
for
ABCD1
ath-e.2
for
ABCD1
ath-m.4.bio
for
ABCD1
ath-m.4.lig
for
ABCD1
ath-m.4.str
for
ABCD1
ath-m.4.tis
for
ABCD1
bna-r.1
for
106410587
bna-r.1
for
106361371
bna-r.1
for
106382600
ghi-r.1
for
107925489
ghi-r.1
for
107950463
ghi-r.1
for
107945455
cit-r.1
for
102617705
gma-u.5
for
100786592
gma-u.5
for
100813765
gma-u.5
for
100796571
ppo-u.5
for
7471510
ppo-u.5
for
18100943
mtr-u.5
for
11417619
sly-u.5
for
ABCD1
sot-r.1
for
102587630
nta-r.1
for
107801433
nta-r.1
for
107770907
osa-u.5
for
4337574
osa-u.5
for
4324471
zma-u.5
for
100383831
zma-u.5
for
100502226
tae-r.2
for
123070454
tae-r.2
for
123063605
tae-r.2
for
123080924
hvu-r.1
for
123437727
hvu-r.1
for
123445636
hvu-r.1
for
123431289
sbi-r.1
for
8066604
sbi-r.1
for
8074123
bdi-r.1
for
100823561
bdi-r.1
for
100828676
cre-r.1
for
CHLRE_15g637761v5


Ortholog ID: 4117
Species ath bna bna bna ghi ghi ghi cit gma gma gma ppo ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi cre
Symbol ABCD1 LOC106410587 LOC106361371 LOC106382600 LOC107950463 LOC107913671 LOC107898484 LOC102617705 LOC100786592 LOC100796571 LOC100791623 LOC7471510 LOC18100943 LOC11417619 ABCD1 LOC102587630 LOC107801433 LOC107770907 LOC4337574 LOC4324471 LOC100383831 LOC100502226 LOC123063605 LOC123089959 LOC123061782 LOC123437727 LOC123445636 LOC123431289 LOC8066604 LOC8074123 LOC100823561 LOC100828676 CHLRE_15g637761v5
Function* peroxisomal ABC transporter 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 uncharacterized LOC100383831 uncharacterized LOC100502226 ABC transporter D family member 1 ABC transporter D family member 1-like ABC transporter D family member 1 ABC transporter D family member 1-like ABC transporter D family member 1-like ABC transporter D family member 1-like ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 ABC transporter D family member 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 4
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
bna00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 4
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
bna00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 6
ghi04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 6
ghi04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 6
ghi04146 Peroxisome 6
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma02010 ABC transporters 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma02010 ABC transporters 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo03013 Nucleocytoplasmic transport 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 3
mtr00071 Fatty acid degradation 3
mtr01212 Fatty acid metabolism 3
mtr04814 Motor proteins 2
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 4
sly00562 Inositol phosphate metabolism 3
sly04070 Phosphatidylinositol signaling system 2
sly04120 Ubiquitin mediated proteolysis 2
sly00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04146 Peroxisome 4
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04146 Peroxisome 4
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 6
cre00071 Fatty acid degradation 3
cre01212 Fatty acid metabolism 3
cre04146 Peroxisome 3
cre00630 Glyoxylate and dicarboxylate metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830144 106410587 106361371 106382600 107950463 107913671 107898484 102617705 100786592 100796571 100791623 7471510 18100943 11417619 101260717 102587630 107801433 107770907 4337574 4324471 100383831 100502226 123063605 123089959 123061782 123437727 123445636 123431289 8066604 8074123 100823561 100828676 5726700
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