ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7471510	ABC transporter D family member 1
ppo-r.4	7471510	ABC transporter D family member 1
ppo-u.5	18100943	ABC transporter D family member 1
gma-u.5	100813765	ABC transporter D family member 1
gma-u.5	100796571	ABC transporter D family member 1
gma-u.5	100791623	ABC transporter D family member 1
mtr-u.5	11417619	ABC transporter D family member 1
ath-u.5	ABCD1	peroxisomal ABC transporter 1
sly-u.5	ABCD1	ABC transporter D family member 1
osa-u.5	4337574	ABC transporter D family member 1
osa-u.5	4324471	ABC transporter D family member 1
zma-u.5	100383831	uncharacterized LOC100383831
zma-u.5	100502226	uncharacterized LOC100502226

functional annotation

KEGG

pop02010 [list] [network] ABC transporters (92 genes)

pop04146 [list] [network] Peroxisome (120 genes)

GO BP

GO:0015910 [list] [network] long-chain fatty acid import into peroxisome	(2 genes)	IEA
GO:0042760 [list] [network] very long-chain fatty acid catabolic process	(2 genes)	IEA
GO:0006635 [list] [network] fatty acid beta-oxidation	(26 genes)	IEA
GO:0007031 [list] [network] peroxisome organization	(39 genes)	IEA

GO CC

GO:0005778 [list] [network] peroxisomal membrane

(39 genes)

IEA

GO MF

GO:0005324 [list] [network] long-chain fatty acid transmembrane transporter activity	(2 genes)	IEA
GO:0140359 [list] [network] ABC-type transporter activity	(136 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(550 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2559 genes)	IEA

Protein

XP_024456070.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo 1, mito 1, E.R. 1, pero 1

(predict for XP_024456070.2)

Subcellular
localization
TargetP

mito 9

(predict for XP_024456070.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7471510 .	ppo-r.4 for 7471510 .	ppo-u.5 for 18100943 .	gma-u.5 for 100813765 .	gma-u.5 for 100796571 .	gma-u.5 for 100791623 .	mtr-u.5 for 11417619 .	ath-u.5 for ABCD1 .	sly-u.5 for ABCD1 .	osa-u.5 for 4337574 .	osa-u.5 for 4324471 .	zma-u.5 for 100383831 .	zma-u.5 for 100502226 .

Ortholog ID: 4117

Species

ath

gma

sly

osa

zma

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

ABCD1

ABCD1

Function^*

peroxisomal ABC transporter 1

ABC transporter D family member 1

uncharacterized LOC100383831

uncharacterized LOC100502226

ABC transporter D family member 1

ABC transporter D family member 1-like

ABC transporter D family member 1

uncharacterized protein

ABC transporter D family member 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath03083	Polycomb repressive complex	2
ath03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma02010	ABC transporters	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04146	Peroxisome	4
sly00562	Inositol phosphate metabolism	3
sly04070	Phosphatidylinositol signaling system	2
sly04120	Ubiquitin mediated proteolysis	2
sly00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00020	Citrate cycle (TCA cycle)	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	5
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2
ppo03013	Nucleocytoplasmic transport	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04146	Peroxisome	3
mtr00071	Fatty acid degradation	3
mtr01212	Fatty acid metabolism	3
mtr04814	Motor proteins	2
mtr00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	6
ghi04146	Peroxisome	6
ghi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	6
ghi04146	Peroxisome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	4
bna04146	Peroxisome	3
bna03015	mRNA surveillance pathway	2
bna04142	Lysosome	2
bna00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	4
bna04146	Peroxisome	3
bna03015	mRNA surveillance pathway	2
bna04142	Lysosome	2
bna00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	6
cre00071	Fatty acid degradation	3
cre01212	Fatty acid metabolism	3
cre04146	Peroxisome	3
cre00630	Glyoxylate and dicarboxylate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	4
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta04146	Peroxisome	4
nta00071	Fatty acid degradation	2
nta00410	beta-Alanine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta04146	Peroxisome	4
nta00071	Fatty acid degradation	2
nta00410	beta-Alanine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

830144

100791623

100796571

101260717

4324471

4337574

100383831

100502226

7471510

18100943

11417619

123061782

123089959

123431289

123445636

107898484

107950463

106382600

106361371

5726700

8066604

8074123

102587630

102617705

100828676

100823561

107770907

107801433

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7471510 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7471510 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	sly	osa	zma	cre	ghi	cit	vvi	hvu	bdi	sot	bra	sbi	tae	nta	bna
Paralog	3	3	1	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7471510 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7471510 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**