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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-u.5   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-r.7   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-m.9   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-e.2   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-m.4.bio   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-m.4.lig   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-m.4.str   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-m.4.tis   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-u.5   AT5G23330   Nucleotidylyl transferase superfamily protein 
 bra-r.6   103855777   FAD synthetase 2, chloroplastic 
 bna-r.1   106384973   FAD synthetase 2, chloroplastic 
 bna-r.1   111210462   FAD synthetase 2, chloroplastic-like 
 ghi-r.1   107949010   FAD synthetase 2, chloroplastic 
 ghi-r.1   107898875   FAD synthetase 2, chloroplastic 
 cit-r.1   102621412   FAD synthetase 2, chloroplastic 
 gma-u.5   100808911   FAD synthetase 1, chloroplastic 
 vvi-u.5   100254929   FAD synthetase 1, chloroplastic 
 ppo-u.5   7457162   FAD synthetase 2, chloroplastic 
 mtr-u.5   11425430   FAD synthetase 1, chloroplastic 
 sly-u.5   101268091   nucleotidyl transferase superfamily protein 
 sot-r.1   102585096   FAD synthetase 1, chloroplastic-like 
 nta-r.1   107777556   FAD synthetase 2, chloroplastic 
 nta-r.1   107762451   FAD synthetase 2, chloroplastic 
 osa-u.5   4334460   FAD synthetase, chloroplastic-like 
 zma-u.5   100284794   riboflavin kinase family protein 
 tae-r.2   123111818   FAD synthetase, chloroplastic 
 tae-r.2   123103602   FAD synthetase, chloroplastic 
 tae-r.2   123121374   FAD synthetase, chloroplastic 
 hvu-r.1   123397813   FAD synthetase, chloroplastic-like 
 sbi-r.1   8061149   FAD synthetase, chloroplastic 
 bdi-r.1   100834038   FAD synthetase, chloroplastic 
 cre-r.1   CHLRE_13g607600v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G08340 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G08340 (ath-m.4.hor coexpression data)

CoexMap"830732"


athAT5G08340 | Entrez gene ID : 830732      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00740 [list] [network] Riboflavin metabolism (20 genes)
ath01240 [list] [network] Biosynthesis of cofactors (237 genes)
GO BP
GO:0006747 [list] [network] FAD biosynthetic process  (2 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
GO:0003919 [list] [network] FMN adenylyltransferase activity  (3 genes)  IDA  
Protein NP_568192.2 [sequence] [blastp]
NP_974751.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_568192.2)
chlo 9  (predict for NP_974751.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_568192.2)
other 4,  chlo 3  (predict for NP_974751.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G08340
ath-u.5
for
AT5G08340
ath-r.7
for
AT5G08340
ath-m.9
for
AT5G08340
ath-e.2
for
AT5G08340
ath-m.4.bio
for
AT5G08340
ath-m.4.lig
for
AT5G08340
ath-m.4.str
for
AT5G08340
ath-m.4.tis
for
AT5G08340
ath-u.5
for
AT5G23330
bra-r.6
for
103855777
bna-r.1
for
106384973
bna-r.1
for
111210462
ghi-r.1
for
107949010
ghi-r.1
for
107898875
cit-r.1
for
102621412
gma-u.5
for
100808911
vvi-u.5
for
100254929
ppo-u.5
for
7457162
mtr-u.5
for
11425430
sly-u.5
for
101268091
sot-r.1
for
102585096
nta-r.1
for
107777556
nta-r.1
for
107762451
osa-u.5
for
4334460
zma-u.5
for
100284794
tae-r.2
for
123111818
tae-r.2
for
123103602
tae-r.2
for
123121374
hvu-r.1
for
123397813
sbi-r.1
for
8061149
bdi-r.1
for
100834038
cre-r.1
for
CHLRE_13g607600v5


Ortholog ID: 9644
Species ath ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G08340 AT5G23330 LOC103855777 LOC106384973 LOC111210462 LOC107949010 LOC107898875 LOC102621412 LOC100808911 LOC100254929 LOC7457162 LOC11425430 LOC101268091 LOC102585096 LOC107777556 LOC107762451 LOC4334460 LOC100284794 LOC123111818 LOC123103602 LOC123121374 LOC123397813 LOC8061149 LOC100834038 CHLRE_13g607600v5
Function* Nucleotidylyl transferase superfamily protein Nucleotidylyl transferase superfamily protein FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic-like FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 1, chloroplastic FAD synthetase 1, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 1, chloroplastic nucleotidyl transferase superfamily protein FAD synthetase 1, chloroplastic-like FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase, chloroplastic-like riboflavin kinase family protein FAD synthetase, chloroplastic FAD synthetase, chloroplastic FAD synthetase, chloroplastic FAD synthetase, chloroplastic-like FAD synthetase, chloroplastic FAD synthetase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00740 Riboflavin metabolism 2
sly01240 Biosynthesis of cofactors 2
sly04141 Protein processing in endoplasmic reticulum 2
sly00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 3
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 3
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00620 Pyruvate metabolism 3
cre01210 2-Oxocarboxylic acid metabolism 2
cre00061 Fatty acid biosynthesis 2
cre00640 Propanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830732 832397 103855777 106384973 111210462 107949010 107898875 102621412 100808911 100254929 7457162 11425430 101268091 102585096 107777556 107762451 4334460 100284794 123111818 123103602 123121374 123397813 8061149 100834038 5724704
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