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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G09310   gamma-secretase subunit 
 ath-u.5   AT5G09310   gamma-secretase subunit 
 ath-r.7   AT5G09310   gamma-secretase subunit 
 ath-m.9   AT5G09310   gamma-secretase subunit 
 ath-e.2   AT5G09310   gamma-secretase subunit 
 ath-m.4.bio   AT5G09310   gamma-secretase subunit 
 ath-m.4.lig   AT5G09310   gamma-secretase subunit 
 ath-m.4.str   AT5G09310   gamma-secretase subunit 
 ath-m.4.tis   AT5G09310   gamma-secretase subunit 
 bra-r.6   103855816   probable gamma-secretase subunit PEN-2 
 bra-r.6   103847199   probable gamma-secretase subunit PEN-2 
 bna-r.1   106384943   probable gamma-secretase subunit PEN-2 
 bna-r.1   106419436   probable gamma-secretase subunit PEN-2 
 bna-r.1   106443085   probable gamma-secretase subunit PEN-2 
 ghi-r.1   107959616   probable gamma-secretase subunit PEN-2 
 ghi-r.1   107935803   probable gamma-secretase subunit PEN-2 
 cit-r.1   102609683   probable gamma-secretase subunit PEN-2 
 gma-u.5   106798930   probable gamma-secretase subunit PEN-2 
 gma-u.5   102665782   probable gamma-secretase subunit PEN-2 
 vvi-u.5   104879178   probable gamma-secretase subunit PEN-2 
 ppo-u.5   7466840   probable gamma-secretase subunit PEN-2 
 mtr-u.5   11434074   probable gamma-secretase subunit PEN-2 
 sly-u.5   101265441   probable gamma-secretase subunit PEN-2 
 sot-r.1   102597383   probable gamma-secretase subunit PEN-2 
 nta-r.1   107826899   putative gamma-secretase subunit PEN-2 
 nta-r.1   107810466   putative gamma-secretase subunit PEN-2 
 osa-u.5   4325239   probable gamma-secretase subunit PEN-2 
 zma-u.5   100277447   putative gamma-secretase subunit PEN-2 
 tae-r.2   123080809   probable gamma-secretase subunit PEN-2 
 tae-r.2   123072623   probable gamma-secretase subunit PEN-2 
 tae-r.2   123063517   probable gamma-secretase subunit PEN-2 
 hvu-r.1   123445582   probable gamma-secretase subunit PEN-2 
 sbi-r.1   8077391   probable gamma-secretase subunit PEN-2 
 bdi-r.1   100821291   probable gamma-secretase subunit PEN-2 
 cre-r.1   CHLRE_07g323050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G09310 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G09310 (ath-m.4.hor coexpression data)

CoexMap"830790"


athAT5G09310 | Entrez gene ID : 830790      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005798 [list] [network] Golgi-associated vesicle  (19 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_196493.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl_plas 3,  chlo 2,  nucl 2,  cyto 2,  plas 2,  mito 1  (predict for NP_196493.1)
Subcellular
localization
TargetP
other 8,  chlo 6  (predict for NP_196493.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G09310
ath-u.5
for
AT5G09310
ath-r.7
for
AT5G09310
ath-m.9
for
AT5G09310
ath-e.2
for
AT5G09310
ath-m.4.bio
for
AT5G09310
ath-m.4.lig
for
AT5G09310
ath-m.4.str
for
AT5G09310
ath-m.4.tis
for
AT5G09310
bra-r.6
for
103855816
bra-r.6
for
103847199
bna-r.1
for
106384943
bna-r.1
for
106419436
bna-r.1
for
106443085
ghi-r.1
for
107959616
ghi-r.1
for
107935803
cit-r.1
for
102609683
gma-u.5
for
106798930
gma-u.5
for
102665782
vvi-u.5
for
104879178
ppo-u.5
for
7466840
mtr-u.5
for
11434074
sly-u.5
for
101265441
sot-r.1
for
102597383
nta-r.1
for
107826899
nta-r.1
for
107810466
osa-u.5
for
4325239
zma-u.5
for
100277447
tae-r.2
for
123080809
tae-r.2
for
123072623
tae-r.2
for
123063517
hvu-r.1
for
123445582
sbi-r.1
for
8077391
bdi-r.1
for
100821291
cre-r.1
for
CHLRE_07g323050v5


Ortholog ID: 9082
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G09310 LOC103855816 LOC103847199 LOC106384943 LOC106419436 LOC106443085 LOC107959616 LOC107935803 LOC102609683 LOC106798930 LOC102665782 LOC104879178 LOC7466840 LOC11434074 LOC101265441 LOC102597383 LOC107826899 LOC107810466 LOC4325239 LOC100277447 LOC123080809 LOC123072623 LOC123063517 LOC123445582 LOC8077391 LOC100821291 CHLRE_07g323050v5
Function* gamma-secretase subunit probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 putative gamma-secretase subunit PEN-2 putative gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 putative gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
bna03040 Spliceosome 4
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 5
bna04120 Ubiquitin mediated proteolysis 5
bna04141 Protein processing in endoplasmic reticulum 5
bna03040 Spliceosome 4
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna04141 Protein processing in endoplasmic reticulum 7
bna03083 Polycomb repressive complex 6
bna03040 Spliceosome 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00270 Cysteine and methionine metabolism 2
ghi00543 Exopolysaccharide biosynthesis 2
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma03050 Proteasome 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma03050 Proteasome 6
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04142 Lysosome 3
vvi04145 Phagosome 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot00190 Oxidative phosphorylation 3
sot04145 Phagosome 3
sot04141 Protein processing in endoplasmic reticulum 3
sot00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
nta00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
nta00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
osa04120 Ubiquitin mediated proteolysis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
tae04142 Lysosome 5
tae04145 Phagosome 5
tae03082 ATP-dependent chromatin remodeling 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae00730 Thiamine metabolism 2
tae00740 Riboflavin metabolism 2
tae01240 Biosynthesis of cofactors 2
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu00190 Oxidative phosphorylation 2
hvu03013 Nucleocytoplasmic transport 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03020 RNA polymerase 2
sbi03022 Basal transcription factors 2
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830790 103855816 103847199 106384943 106419436 106443085 107959616 107935803 102609683 106798930 102665782 104879178 7466840 11434074 101265441 102597383 107826899 107810466 4325239 100277447 123080809 123072623 123063517 123445582 8077391 100821291 5726417
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