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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G37910   Protein with RING/U-box and TRAF-like domain 
 ath-m.9   AT5G37910   Protein with RING/U-box and TRAF-like domain 
 ath-m.4.bio   AT5G37910   Protein with RING/U-box and TRAF-like domain 
 ath-m.4.lig   AT5G37910   Protein with RING/U-box and TRAF-like domain 
 ath-m.4.str   AT5G37910   Protein with RING/U-box and TRAF-like domain 
 ath-m.4.tis   AT5G37910   Protein with RING/U-box and TRAF-like domain 
 bra-r.6   103857391   E3 ubiquitin-protein ligase SINA-like 2 
 bra-r.6   103864155   E3 ubiquitin-protein ligase SINA-like 7 
 ghi-r.1   107916650   E3 ubiquitin-protein ligase SINA-like 10 
 ghi-r.1   107912704   E3 ubiquitin-protein ligase SINA-like 10 
 cit-r.1   102613468   E3 ubiquitin-protein ligase SINA-like 10 
 cit-r.1   102612987   E3 ubiquitin-protein ligase SINA-like 4 
 gma-u.5   100778869   E3 ubiquitin-protein ligase SINA-like 10 
 gma-u.5   100797881   E3 ubiquitin-protein ligase SINA-like 10 
 vvi-u.5   100260463   E3 ubiquitin-protein ligase SINA-like 7 
 ppo-u.5   18106453   E3 ubiquitin-protein ligase SINA-like 7 
 ppo-u.5   7494532   E3 ubiquitin-protein ligase SINA-like 7 
 mtr-u.5   11418747   E3 ubiquitin-protein ligase SINA-like 10 
 sly-u.5   109119702   E3 ubiquitin-protein ligase SINA-like 10 
 sly-u.5   101256260   putative E3 ubiquitin-protein ligase SINA-like 6 
 sly-u.5   101262084   putative E3 ubiquitin-protein ligase SINA-like 6 
 sot-r.1   102583504   uncharacterized LOC102583504 
 nta-r.1   107810964   E3 ubiquitin-protein ligase SINA-like 7 
 nta-r.1   107825820   uncharacterized LOC107825820 
 zma-u.5   100273809   Ubiquitin-protein ligase/ zinc ion binding protein 
 hvu-r.1   123449949   E3 ubiquitin-protein ligase SINA-like 10 
 sbi-r.1   8058142   putative E3 ubiquitin-protein ligase SINA-like 6 
 sbi-r.1   8069514   E3 ubiquitin-protein ligase SINA-like 11 
 bdi-r.1   100824582   E3 ubiquitin-protein ligase SINA-like 7 
 cre-r.1   CHLRE_14g630150v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G37910 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G37910 (ath-m.4.hor coexpression data)

CoexMap"833770"


athAT5G37910 | Entrez gene ID : 833770      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta zma hvu sbi bdi cre osa tae bna
Paralog 6 2 2 2 2 1 2 1 3 1 2 1 1 2 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (162 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
Protein NP_198607.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  cysk 1  (predict for NP_198607.1)
Subcellular
localization
TargetP
other 7  (predict for NP_198607.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G37910
ath-m.9
for
AT5G37910
ath-m.4.bio
for
AT5G37910
ath-m.4.lig
for
AT5G37910
ath-m.4.str
for
AT5G37910
ath-m.4.tis
for
AT5G37910
bra-r.6
for
103857391
bra-r.6
for
103864155
ghi-r.1
for
107916650
ghi-r.1
for
107912704
cit-r.1
for
102613468
cit-r.1
for
102612987
gma-u.5
for
100778869
gma-u.5
for
100797881
vvi-u.5
for
100260463
ppo-u.5
for
18106453
ppo-u.5
for
7494532
mtr-u.5
for
11418747
sly-u.5
for
109119702
sly-u.5
for
101256260
sly-u.5
for
101262084
sot-r.1
for
102583504
nta-r.1
for
107810964
nta-r.1
for
107825820
zma-u.5
for
100273809
hvu-r.1
for
123449949
sbi-r.1
for
8058142
sbi-r.1
for
8069514
bdi-r.1
for
100824582
cre-r.1
for
CHLRE_14g630150v5


Ortholog ID: 324
Species ath ath bra bna ghi ghi cit cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae hvu sbi bdi cre
Symbol AT1G66620 AT5G62800 LOC103831113 LOC106446346 LOC107916650 LOC107912704 LOC102613468 LOC102612987 LOC100778869 LOC100797881 LOC100260463 LOC18106453 LOC7494532 LOC25483069 LOC11425847 LOC101262084 LOC102583504 LOC107810964 LOC107825820 LOC4340862 LOC100273809 LOC123106050 LOC123449949 LOC8058142 LOC100824582 CHLRE_14g630150v5
Function* Protein with RING/U-box and TRAF-like domain Protein with RING/U-box and TRAF-like domain E3 ubiquitin-protein ligase SINA-like 2 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 4 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 7 polyubiquitin 9 E3 ubiquitin-protein ligase SINA-like 7 putative E3 ubiquitin-protein ligase SINA-like 6 uncharacterized LOC102583504 E3 ubiquitin-protein ligase SINA-like 7 uncharacterized LOC107825820 putative E3 ubiquitin-protein ligase SINA-like 9 Ubiquitin-protein ligase/ zinc ion binding protein putative E3 ubiquitin-protein ligase SINA-like 9 E3 ubiquitin-protein ligase SINA-like 10 putative E3 ubiquitin-protein ligase SINA-like 6 E3 ubiquitin-protein ligase SINA-like 7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 2
ppo00410 beta-Alanine metabolism 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 5
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00600 Sphingolipid metabolism 3
tae04142 Lysosome 3
tae04136 Autophagy - other 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00590 Arachidonic acid metabolism 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842980 836401 103831113 106446346 107916650 107912704 102613468 102612987 100778869 100797881 100260463 18106453 7494532 25483069 11425847 101262084 102583504 107810964 107825820 4340862 100273809 123106050 123449949 8058142 100824582 66056318
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