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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100260463   E3 ubiquitin-protein ligase SINA-like 7 
 vvi-r.5   100260463   E3 ubiquitin-protein ligase SINA-like 7 
 gma-u.5   100797881   E3 ubiquitin-protein ligase SINA-like 10 
 gma-u.5   100778869   E3 ubiquitin-protein ligase SINA-like 10 
 ppo-u.5   18106453   E3 ubiquitin-protein ligase SINA-like 7 
 ppo-u.5   7494532   E3 ubiquitin-protein ligase SINA-like 7 
 mtr-u.5   11425847   E3 ubiquitin-protein ligase SINA-like 7 
 sly-u.5   101262084   putative E3 ubiquitin-protein ligase SINA-like 6 
 sly-u.5   101256260   putative E3 ubiquitin-protein ligase SINA-like 6 
 zma-u.5   100273809   Ubiquitin-protein ligase/ zinc ion binding protein 

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Top 50 coexpressed genes to 100260463 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100260463 (vvi-u.5 coexpression data)

CoexMap"100260463"


vviLOC100260463 | Entrez gene ID : 100260463      
Species vvi gma ppo mtr sly zma bdi hvu bra cit bna ath sbi ghi osa sot nta cre tae
Paralog 2 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04120 [list] [network] Ubiquitin mediated proteolysis (130 genes)
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
Protein XP_002271757.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 1,  plas 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_002271757.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002271757.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100260463
vvi-r.5
for
100260463
gma-u.5
for
100797881
gma-u.5
for
100778869
ppo-u.5
for
18106453
ppo-u.5
for
7494532
mtr-u.5
for
11425847
sly-u.5
for
101262084
sly-u.5
for
101256260
zma-u.5
for
100273809


Ortholog ID: 324
Species vvi ath gma ppo ppo mtr ghi ghi bna cit sly sot nta nta osa zma tae hvu bdi cre
Symbol LOC100260463 AT5G62800 LOC100778869 LOC18106453 LOC7494532 LOC11425847 LOC107912704 LOC107916650 LOC106446346 LOC102613468 LOC101262084 LOC102583504 LOC107810964 LOC107825820 LOC4340862 LOC100273809 LOC123106050 LOC123449949 LOC100824582 CHLRE_14g630150v5
Function* E3 ubiquitin-protein ligase SINA-like 7 Protein with RING/U-box and TRAF-like domain E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 10 putative E3 ubiquitin-protein ligase SINA-like 6 uncharacterized LOC102583504 E3 ubiquitin-protein ligase SINA-like 7 uncharacterized LOC107825820 putative E3 ubiquitin-protein ligase SINA-like 9 Ubiquitin-protein ligase/ zinc ion binding protein putative E3 ubiquitin-protein ligase SINA-like 9 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 2
ppo00410 beta-Alanine metabolism 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 5
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00600 Sphingolipid metabolism 3
tae04142 Lysosome 3
tae04136 Autophagy - other 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100260463 836401 100778869 18106453 7494532 11425847 107912704 107916650 106446346 102613468 101262084 102583504 107810964 107825820 4340862 100273809 123106050 123449949 100824582 66056318
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