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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT5G59900   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103845412   putative pentatricopeptide repeat-containing protein At5g59900 
 bna-r.1   106415830   putative pentatricopeptide repeat-containing protein At5g59900 
 bna-r.1   106418362   putative pentatricopeptide repeat-containing protein At5g59900 
 ghi-r.1   107950273   putative pentatricopeptide repeat-containing protein At5g59900 
 ghi-r.1   107963941   putative pentatricopeptide repeat-containing protein At5g59900 
 cit-r.1   102628281   putative pentatricopeptide repeat-containing protein At5g59900 
 gma-u.5   102664565   putative pentatricopeptide repeat-containing protein At5g59900 
 gma-u.5   100797093   putative pentatricopeptide repeat-containing protein At5g59900 
 vvi-u.5   100263886   putative pentatricopeptide repeat-containing protein At5g59900 
 ppo-u.5   7465126   putative pentatricopeptide repeat-containing protein At5g59900 
 mtr-u.5   11441177   putative pentatricopeptide repeat-containing protein At5g59900 
 sly-u.5   101268449   putative pentatricopeptide repeat-containing protein At5g59900 
 sot-r.1   102591090   putative pentatricopeptide repeat-containing protein At5g59900 
 nta-r.1   107791456   uncharacterized LOC107791456 
 nta-r.1   107819597   uncharacterized LOC107819597 

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Top 50 coexpressed genes to AT5G59900 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G59900 (ath-m.4.hor coexpression data)

CoexMap"836112"


athAT5G59900 | Entrez gene ID : 836112    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_200798.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 3,  cyto_mito 2  (predict for NP_200798.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for NP_200798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G59900
ath-u.5
for
AT5G59900
ath-r.7
for
AT5G59900
ath-m.9
for
AT5G59900
ath-e.2
for
AT5G59900
ath-m.4.bio
for
AT5G59900
ath-m.4.lig
for
AT5G59900
ath-m.4.str
for
AT5G59900
ath-m.4.tis
for
AT5G59900
bra-r.6
for
103845412
bna-r.1
for
106415830
bna-r.1
for
106418362
ghi-r.1
for
107950273
ghi-r.1
for
107963941
cit-r.1
for
102628281
gma-u.5
for
102664565
gma-u.5
for
100797093
vvi-u.5
for
100263886
ppo-u.5
for
7465126
mtr-u.5
for
11441177
sly-u.5
for
101268449
sot-r.1
for
102591090
nta-r.1
for
107791456
nta-r.1
for
107819597


Ortholog ID: 13202
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta
Symbol AT5G59900 LOC103845412 LOC106415830 LOC106418362 LOC107950273 LOC107963941 LOC102628281 LOC102664565 LOC100797093 LOC100263886 LOC7465126 LOC11441177 LOC101268449 LOC102591090 LOC107791456 LOC107819597
Function* Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 putative pentatricopeptide repeat-containing protein At5g59900 uncharacterized LOC107791456 uncharacterized LOC107819597
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836112 103845412 106415830 106418362 107950273 107963941 102628281 102664565 100797093 100263886 7465126 11441177 101268449 102591090 107791456 107819597
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