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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 bra-r.6   103872752   uncharacterized LOC103872752 
 bra-r.6   103835842   uncharacterized LOC103835842 
 bna-r.1   106440768   uncharacterized LOC106440768 
 bna-r.1   106401809   general transcription factor 3C polypeptide 2 
 bna-r.1   BNAC08G18840D   uncharacterized BNAC08G18840D 
 ghi-r.1   107944108   uncharacterized LOC107944108 
 ghi-r.1   107925902   uncharacterized LOC107925902 
 cit-r.1   102609984   uncharacterized LOC102609984 
 gma-u.5   100816953   uncharacterized LOC100816953 
 vvi-u.5   100852537   uncharacterized LOC100852537 
 ppo-u.5   7454240   uncharacterized LOC7454240 
 mtr-u.5   25483858   uncharacterized LOC25483858 
 sly-u.5   101256910   uncharacterized LOC101256910 
 sot-r.1   102605692   uncharacterized LOC102605692 
 nta-r.1   107774390   uncharacterized LOC107774390 
 nta-r.1   107770968   uncharacterized LOC107770968 
 osa-u.5   9269796   uncharacterized LOC9269796 
 zma-u.5   103650985   Transducin/WD40 repeat-like superfamily protein 
 tae-r.2   123068552   uncharacterized LOC123068552 
 tae-r.2   123071475   uncharacterized LOC123071475 
 tae-r.2   123079812   uncharacterized LOC123079812 
 hvu-r.1   123444844   uncharacterized LOC123444844 
 hvu-r.1   123450562   uncharacterized LOC123450562 
 sbi-r.1   8062105   uncharacterized LOC8062105 
 bdi-r.1   100830814   uncharacterized LOC100830814 

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Top 50 coexpressed genes to AT1G19485 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G19485 (ath-m.4.hor coexpression data)

CoexMap"838534"


athAT1G19485 | Entrez gene ID : 838534      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 1 1 1 1 1 1 2 1 1 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1274 genes)  IEA  
Protein NP_001185037.1 [sequence] [blastp]
NP_564086.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001185037.1)
nucl 10  (predict for NP_564086.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001185037.1)
other 9  (predict for NP_564086.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT1G19485
ath-u.5
for
AT1G19485
ath-r.7
for
AT1G19485
ath-m.9
for
AT1G19485
ath-e.2
for
AT1G19485
ath-m.4.bio
for
AT1G19485
ath-m.4.lig
for
AT1G19485
ath-m.4.str
for
AT1G19485
ath-m.4.tis
for
AT1G19485
bra-r.6
for
103872752
bra-r.6
for
103835842
bna-r.1
for
106440768
bna-r.1
for
106401809
bna-r.1
for
BNAC08G18840D
ghi-r.1
for
107944108
ghi-r.1
for
107925902
cit-r.1
for
102609984
gma-u.5
for
100816953
vvi-u.5
for
100852537
ppo-u.5
for
7454240
mtr-u.5
for
25483858
sly-u.5
for
101256910
sot-r.1
for
102605692
nta-r.1
for
107774390
nta-r.1
for
107770968
osa-u.5
for
9269796
zma-u.5
for
103650985
tae-r.2
for
123068552
tae-r.2
for
123071475
tae-r.2
for
123079812
hvu-r.1
for
123444844
hvu-r.1
for
123450562
sbi-r.1
for
8062105
bdi-r.1
for
100830814


Ortholog ID: 7807
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu hvu sbi bdi
Symbol AT1G19485 LOC103872752 LOC103835842 LOC106440768 LOC106401809 BNAA06G13690D LOC107944108 LOC107925902 LOC102609984 LOC100816953 LOC100852537 LOC7454240 LOC25483858 LOC101256910 LOC102605692 LOC107774390 LOC107770968 LOC9269796 LOC103650985 LOC123079812 LOC123183150 LOC123062654 LOC123444844 LOC123450562 LOC8062105 LOC100830814
Function* Transducin/WD40 repeat-like superfamily protein uncharacterized LOC103872752 uncharacterized LOC103835842 uncharacterized LOC106440768 general transcription factor 3C polypeptide 2 uncharacterized BNAA06G13690D uncharacterized LOC107944108 uncharacterized LOC107925902 uncharacterized LOC102609984 uncharacterized LOC100816953 uncharacterized LOC100852537 uncharacterized LOC7454240 uncharacterized LOC25483858 uncharacterized LOC101256910 uncharacterized LOC102605692 uncharacterized LOC107774390 uncharacterized LOC107770968 uncharacterized LOC9269796 Transducin/WD40 repeat-like superfamily protein uncharacterized LOC123079812 uncharacterized LOC123183150 uncharacterized LOC123062654 uncharacterized LOC123444844 uncharacterized LOC123450562 uncharacterized LOC8062105 uncharacterized LOC100830814
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 4
bna03430 Mismatch repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 4
sly03430 Mismatch repair 2
sly03440 Homologous recombination 2
sly03030 DNA replication 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04977 Vitamin digestion and absorption 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04977 Vitamin digestion and absorption 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838534 103872752 103835842 106440768 106401809 106346952 107944108 107925902 102609984 100816953 100852537 7454240 25483858 101256910 102605692 107774390 107770968 9269796 103650985 123079812 123183150 123062654 123444844 123450562 8062105 100830814
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