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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   PFD6   prefoldin 6 
 ath-u.5   PFD6   prefoldin 6 
 ath-r.7   PFD6   prefoldin 6 
 ath-m.9   PFD6   prefoldin 6 
 ath-e.2   PFD6   prefoldin 6 
 ath-m.4.bio   PFD6   prefoldin 6 
 ath-m.4.lig   PFD6   prefoldin 6 
 ath-m.4.str   PFD6   prefoldin 6 
 ath-m.4.tis   PFD6   prefoldin 6 
 bra-r.6   103840442   prefoldin subunit 6 
 bra-r.6   103828911   prefoldin subunit 6-like 
 bna-r.1   106367370   prefoldin subunit 6 
 bna-r.1   106421782   prefoldin subunit 6 
 bna-r.1   111212332   prefoldin subunit 6-like 
 ghi-r.1   107935883   prefoldin subunit 6 
 ghi-r.1   107943418   prefoldin subunit 6 
 ghi-r.1   107905883   prefoldin subunit 6 
 cit-r.1   102616924   prefoldin subunit 6 
 gma-u.5   100777779   prefoldin subunit 6 
 gma-u.5   100306488   uncharacterized LOC100306488 
 vvi-u.5   100245160   prefoldin subunit 6 
 ppo-u.5   7463001   prefoldin subunit 6 
 mtr-u.5   11405158   prefoldin subunit 6 
 sly-u.5   101265944   prefoldin subunit 6 
 sot-r.1   102599302   prefoldin subunit 6 
 nta-r.1   107777113   prefoldin subunit 6 
 nta-r.1   107774899   prefoldin subunit 6-like 
 osa-u.5   4328867   prefoldin subunit 6 
 zma-u.5   100282285   prefoldin subunit 6 
 tae-r.2   123077576   prefoldin subunit 6 
 tae-r.2   123069055   prefoldin subunit 6 
 tae-r.2   123060503   prefoldin subunit 6 
 hvu-r.1   123443016   prefoldin subunit 6 
 sbi-r.1   8085587   prefoldin subunit 6 
 bdi-r.1   100821619   prefoldin subunit 6 
 cre-r.1   CHLRE_12g502750v5   uncharacterized protein 

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Top 50 coexpressed genes to PFD6 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PFD6 (ath-m.4.hor coexpression data)

CoexMap"839878"


athPFD6 | Entrez gene ID : 839878      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043622 [list] [network] cortical microtubule organization  (50 genes)  IDA IMP  
GO:0071370 [list] [network] cellular response to gibberellin stimulus  (62 genes)  IDA  
GO:0006457 [list] [network] protein folding  (64 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (185 genes)  IMP  
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO CC
GO:0016272 [list] [network] prefoldin complex  (7 genes)  IDA IPI  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0051879 [list] [network] Hsp90 protein binding  (10 genes)  IDA  
GO:0008017 [list] [network] microtubule binding  (99 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_174292.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 4,  cyto 4,  nucl 2,  nucl_plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_174292.2)
Subcellular
localization
TargetP
other 9  (predict for NP_174292.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
PFD6
ath-u.5
for
PFD6
ath-r.7
for
PFD6
ath-m.9
for
PFD6
ath-e.2
for
PFD6
ath-m.4.bio
for
PFD6
ath-m.4.lig
for
PFD6
ath-m.4.str
for
PFD6
ath-m.4.tis
for
PFD6
bra-r.6
for
103840442
bra-r.6
for
103828911
bna-r.1
for
106367370
bna-r.1
for
106421782
bna-r.1
for
111212332
ghi-r.1
for
107935883
ghi-r.1
for
107943418
ghi-r.1
for
107905883
cit-r.1
for
102616924
gma-u.5
for
100777779
gma-u.5
for
100306488
vvi-u.5
for
100245160
ppo-u.5
for
7463001
mtr-u.5
for
11405158
sly-u.5
for
101265944
sot-r.1
for
102599302
nta-r.1
for
107777113
nta-r.1
for
107774899
osa-u.5
for
4328867
zma-u.5
for
100282285
tae-r.2
for
123077576
tae-r.2
for
123069055
tae-r.2
for
123060503
hvu-r.1
for
123443016
sbi-r.1
for
8085587
bdi-r.1
for
100821619
cre-r.1
for
CHLRE_12g502750v5


Ortholog ID: 8267
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol PFD6 LOC103840442 LOC103828911 LOC106367370 LOC106421782 LOC111212332 LOC107935883 LOC107905883 LOC107914005 LOC102616924 LOC100777779 LOC100306488 LOC100245160 LOC7463001 LOC11405158 LOC101265944 LOC102599302 LOC107777113 LOC107774899 LOC4328867 LOC100282285 LOC123077576 LOC123069055 LOC123060503 LOC123443016 LOC8085587 LOC100821619 CHLRE_12g502750v5
Function* prefoldin 6 prefoldin subunit 6 prefoldin subunit 6-like prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6-like prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 uncharacterized LOC100306488 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6-like prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 prefoldin subunit 6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03020 RNA polymerase 5
ath03420 Nucleotide excision repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03013 Nucleocytoplasmic transport 5
bra03040 Spliceosome 5
bra03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
bna03010 Ribosome 2
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00510 N-Glycan biosynthesis 4
ghi00100 Steroid biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 2
ghi00230 Purine metabolism 2
ghi00730 Thiamine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03040 Spliceosome 3
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit04144 Endocytosis 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03018 RNA degradation 4
gma04120 Ubiquitin mediated proteolysis 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
osa03020 RNA polymerase 2
osa03420 Nucleotide excision repair 2
osa03010 Ribosome 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 5
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae03040 Spliceosome 4
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 8
sbi03010 Ribosome 4
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03040 Spliceosome 2
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03420 Nucleotide excision repair 3
cre04120 Ubiquitin mediated proteolysis 3
cre03020 RNA polymerase 2
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839878 103840442 103828911 106367370 106421782 111212332 107935883 107905883 107914005 102616924 100777779 100306488 100245160 7463001 11405158 101265944 102599302 107777113 107774899 4328867 100282285 123077576 123069055 123060503 123443016 8085587 100821619 5716415
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