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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   DEK1   calpain-type cysteine protease family 
 ath-u.5   DEK1   calpain-type cysteine protease family 
 ath-r.7   DEK1   calpain-type cysteine protease family 
 ath-m.9   DEK1   calpain-type cysteine protease family 
 ath-e.2   DEK1   calpain-type cysteine protease family 
 ath-m.4.bio   DEK1   calpain-type cysteine protease family 
 ath-m.4.lig   DEK1   calpain-type cysteine protease family 
 ath-m.4.str   DEK1   calpain-type cysteine protease family 
 ath-m.4.tis   DEK1   calpain-type cysteine protease family 
 bra-r.6   103871041   calpain-type cysteine protease DEK1 
 bna-r.1   106345771   calpain-type cysteine protease DEK1 
 bna-r.1   106410218   calpain-type cysteine protease DEK1-like 
 ghi-r.1   107927100   calpain-type cysteine protease DEK1 
 ghi-r.1   107963811   calpain-type cysteine protease DEK1 
 cit-r.1   102622111   calpain-type cysteine protease DEK1 
 gma-u.5   100809231   calpain-type cysteine protease DEK1 
 gma-u.5   100778679   calpain-type cysteine protease DEK1 
 vvi-u.5   100244915   calpain-type cysteine protease DEK1 
 ppo-u.5   7487061   calpain-type cysteine protease DEK1 
 ppo-u.5   7461353   calpain-type cysteine protease DEK1 
 mtr-u.5   11405221   calpain-type cysteine protease DEK1 
 sly-u.5   101266917   calpain-type cysteine protease DEK1 
 sot-r.1   102597953   calpain-type cysteine protease DEK1 
 nta-r.1   107773792   calpain-type cysteine protease DEK1 
 osa-u.5   4330484   calpain-type cysteine protease ADL1-like 
 zma-u.5   542509   defective kernel 1 
 tae-r.2   123137948   calpain-type cysteine protease ADL1 
 tae-r.2   123128152   calpain-type cysteine protease ADL1 
 tae-r.2   123145251   calpain-type cysteine protease ADL1 
 hvu-r.1   123401574   calpain-type cysteine protease ADL1 
 sbi-r.1   8084012   calpain-type cysteine protease DEK1 
 bdi-r.1   100827988   calpain-type cysteine protease ADL1 
 cre-r.1   CHLRE_02g112250v5   uncharacterized protein 

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Top 50 coexpressed genes to DEK1 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DEK1 (ath-m.4.hor coexpression data)

CoexMap"841981"


athDEK1 | Entrez gene ID : 841981      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0097264 [list] [network] self proteolysis  (1 genes)  IDA  
GO:0040014 [list] [network] regulation of multicellular organism growth  (3 genes)  IMP  
GO:2000011 [list] [network] regulation of adaxial/abaxial pattern formation  (3 genes)  ISS  
GO:0090392 [list] [network] sepal giant cell differentiation  (4 genes)  IMP  
GO:0032877 [list] [network] positive regulation of DNA endoreduplication  (6 genes)  IMP  
GO:0090628 [list] [network] plant epidermal cell fate specification  (7 genes)  IMP  
GO:2000014 [list] [network] regulation of endosperm development  (10 genes)  IMP  
GO:0009934 [list] [network] regulation of meristem structural organization  (22 genes)  IMP  
GO:2000024 [list] [network] regulation of leaf development  (22 genes)  IMP  
GO:0001708 [list] [network] cell fate specification  (33 genes)  IMP  
GO:0009960 [list] [network] endosperm development  (35 genes)  IMP  
GO:0042127 [list] [network] regulation of cell population proliferation  (93 genes)  IMP  
GO:0001558 [list] [network] regulation of cell growth  (119 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP NAS  
GO CC
GO:0010008 [list] [network] endosome membrane  (53 genes)  IDA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (120 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0004198 [list] [network] calcium-dependent cysteine-type endopeptidase activity  (1 genes)  IEA  
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (21 genes)  IDA  
GO:0008234 [list] [network] cysteine-type peptidase activity  (75 genes)  IMP  
Protein NP_001185238.1 [sequence] [blastp]
NP_001319240.1 [sequence] [blastp]
NP_001321273.1 [sequence] [blastp]
NP_175932.2 [sequence] [blastp]
NP_850966.1 [sequence] [blastp]
NP_850967.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 2,  E.R. 1,  nucl 1,  pero 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001185238.1)
plas 5,  chlo 2,  E.R. 1,  nucl 1,  pero 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001319240.1)
plas 5,  chlo 2,  E.R. 1,  nucl 1,  pero 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001321273.1)
plas 5,  chlo 2,  E.R. 1,  nucl 1,  pero 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_175932.2)
plas 5,  chlo 2,  E.R. 1,  nucl 1,  pero 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_850966.1)
plas 5,  chlo 2,  E.R. 1,  nucl 1,  pero 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_850967.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for NP_001185238.1)
other 5,  scret 3  (predict for NP_001319240.1)
other 5,  scret 3  (predict for NP_001321273.1)
other 5,  scret 3  (predict for NP_175932.2)
other 5,  scret 3  (predict for NP_850966.1)
other 5,  scret 3  (predict for NP_850967.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
DEK1
ath-u.5
for
DEK1
ath-r.7
for
DEK1
ath-m.9
for
DEK1
ath-e.2
for
DEK1
ath-m.4.bio
for
DEK1
ath-m.4.lig
for
DEK1
ath-m.4.str
for
DEK1
ath-m.4.tis
for
DEK1
bra-r.6
for
103871041
bna-r.1
for
106345771
bna-r.1
for
106410218
ghi-r.1
for
107927100
ghi-r.1
for
107963811
cit-r.1
for
102622111
gma-u.5
for
100809231
gma-u.5
for
100778679
vvi-u.5
for
100244915
ppo-u.5
for
7487061
ppo-u.5
for
7461353
mtr-u.5
for
11405221
sly-u.5
for
101266917
sot-r.1
for
102597953
nta-r.1
for
107773792
osa-u.5
for
4330484
zma-u.5
for
542509
tae-r.2
for
123137948
tae-r.2
for
123128152
tae-r.2
for
123145251
hvu-r.1
for
123401574
sbi-r.1
for
8084012
bdi-r.1
for
100827988
cre-r.1
for
CHLRE_02g112250v5


Ortholog ID: 10519
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi cre
Symbol DEK1 LOC103871041 LOC106345771 LOC106410218 LOC107927100 LOC107963811 LOC102622111 LOC100809231 LOC100778679 LOC100244915 LOC7487061 LOC7461353 LOC11405221 LOC101266917 LOC102597953 LOC107773792 LOC4330484 LOC542509 LOC123137948 LOC123128152 LOC123145251 LOC123401574 LOC8084012 LOC100827988 CHLRE_02g112250v5
Function* calpain-type cysteine protease family calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1-like calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease DEK1 calpain-type cysteine protease ADL1-like defective kernel 1 calpain-type cysteine protease ADL1 calpain-type cysteine protease ADL1 calpain-type cysteine protease ADL1 calpain-type cysteine protease ADL1 calpain-type cysteine protease DEK1 calpain-type cysteine protease ADL1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00514 Other types of O-glycan biosynthesis 3
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
tae00514 Other types of O-glycan biosynthesis 2
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841981 103871041 106345771 106410218 107927100 107963811 102622111 100809231 100778679 100244915 7487061 7461353 11405221 101266917 102597953 107773792 4330484 542509 123137948 123128152 123145251 123401574 8084012 100827988 5725238
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