ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8055642	facilitated trehalose transporter Tret1
zma-u.5	103638926	serine/arginine repetitive matrix protein 1
zma-u.5	100284853	glycoprotein
osa-u.5	4349390	cell wall protein RBR3
tae-r.2	123181679	serine/arginine repetitive matrix protein 1
tae-r.2	123128482	protein ENL
tae-r.2	123052416	protein ENL
hvu-r.1	123411734	protein ENL-like
bdi-r.1	100830834	serine/arginine repetitive matrix protein 1
ath-u.5	AT3G60380	cotton fiber protein
ath-u.5	AT4G16790	hydroxyproline-rich glycoprotein family protein
gma-u.5	102659662	uncharacterized protein DDB_G0284459
gma-u.5	102664801	uncharacterized LOC102664801
sly-u.5	104648963	uncharacterized LOC104648963
sly-u.5	101245665	uncharacterized LOC101245665
bra-r.6	103830253	uncharacterized LOC103830253
bra-r.6	103833978	serine/arginine repetitive matrix protein 1
bra-r.6	103869146	uncharacterized protein DDB_G0284459
vvi-u.5	104878316	uncharacterized LOC104878316
vvi-u.5	104881830	uncharacterized LOC104881830
ppo-u.5	18105043	uncharacterized LOC18105043
ppo-u.5	7483792	uncharacterized LOC7483792
ppo-u.5	7461989	auxilin-related protein 1
mtr-u.5	25497466	uncharacterized LOC25497466
mtr-u.5	11410462	uncharacterized LOC11410462
ghi-r.1	107910879	uncharacterized LOC107910879
ghi-r.1	107886056	zinc finger CCCH domain-containing protein 18
ghi-r.1	107924082	uncharacterized LOC107924082
bna-r.1	106445097	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic
bna-r.1	111215148	troponin T, skeletal muscle
bna-r.1	106355611	uncharacterized LOC106355611
sot-r.1	107062983	uncharacterized LOC107062983
sot-r.1	102597541	uncharacterized LOC102597541
cit-r.1	102607181	uncharacterized LOC102607181
cit-r.1	102617569	uncharacterized LOC102617569
nta-r.1	107816655	uncharacterized LOC107816655
nta-r.1	107795153	uncharacterized LOC107795153
nta-r.1	107775760	uncharacterized LOC107775760

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_021310782.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 2, E.R._vacu 2, nucl 1, extr 1, chlo_mito 1

(predict for XP_021310782.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_021310782.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8055642	zma-u.5 for 103638926	zma-u.5 for 100284853	osa-u.5 for 4349390	tae-r.2 for 123181679	tae-r.2 for 123128482	tae-r.2 for 123052416	hvu-r.1 for 123411734	bdi-r.1 for 100830834	ath-u.5 for AT3G60380	ath-u.5 for AT4G16790	gma-u.5 for 102659662	gma-u.5 for 102664801	sly-u.5 for 104648963	sly-u.5 for 101245665	bra-r.6 for 103830253	bra-r.6 for 103833978	bra-r.6 for 103869146	vvi-u.5 for 104878316	vvi-u.5 for 104881830	ppo-u.5 for 18105043	ppo-u.5 for 7483792	ppo-u.5 for 7461989	mtr-u.5 for 25497466	mtr-u.5 for 11410462	ghi-r.1 for 107910879	ghi-r.1 for 107886056	ghi-r.1 for 107924082	bna-r.1 for 106445097	bna-r.1 for 111215148	bna-r.1 for 106355611	sot-r.1 for 107062983	sot-r.1 for 102597541	cit-r.1 for 102607181	cit-r.1 for 102617569	nta-r.1 for 107816655	nta-r.1 for 107795153	nta-r.1 for 107775760

Ortholog

Ortholog ID: 2481

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

facilitated trehalose transporter Tret1

serine/arginine repetitive matrix protein 1

glycoprotein

cell wall protein RBR3

serine/arginine repetitive matrix protein 1

protein ENL

protein ENL-like

serine/arginine repetitive matrix protein 1

cotton fiber protein

hydroxyproline-rich glycoprotein family protein

uncharacterized protein DDB_G0284459

uncharacterized LOC104648963

uncharacterized LOC101245665

serine/arginine repetitive matrix protein 1

uncharacterized protein DDB_G0284459

uncharacterized LOC103862884

uncharacterized LOC104878316

uncharacterized LOC104881830

uncharacterized LOC7483792

auxilin-related protein 1

uncharacterized LOC25497466

uncharacterized LOC11410462

uncharacterized LOC107933716

uncharacterized LOC107933703

peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic

troponin T, skeletal muscle

uncharacterized LOC106403845

uncharacterized LOC107062983

uncharacterized LOC102597541

uncharacterized LOC102607181

uncharacterized LOC102617569

uncharacterized LOC107816655

uncharacterized LOC107775760

uncharacterized LOC142178239

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00330	Arginine and proline metabolism	2
mtr00360	Phenylalanine metabolism	2
mtr00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9
bna00240	Pyrimidine metabolism	4
bna01232	Nucleotide metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	4
bna01232	Nucleotide metabolism	4
bna03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00906	Carotenoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

8055642

103638926

100284853

4349390

123181679

123128482

123052416

123411734

100830834

825209

827385

102659662

104648963

101245665

103833978

103869146

103862884

104878316

104881830

7483792

7461989

25497466

11410462

107933716

107933703

106445097

111215148

106403845

107062983

102597541

102607181

102617569

107816655

107775760

142178239

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8055642 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8055642 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	2	1	3	1	1	2	2	2	3	2	3	2	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8055642 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8055642 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**