ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8055872	eukaryotic translation initiation factor 3 subunit C
sbi-r.1	8077865	eukaryotic translation initiation factor 3 subunit C
zma-u.5	103632933	eukaryotic translation initiation factor 3 subunit C
zma-u.5	103646106	eukaryotic translation initiation factor 3 subunit C
zma-u.5	100502419	uncharacterized LOC100502419
osa-u.5	4342306	eukaryotic translation initiation factor 3 subunit C
osa-u.5	4328137	eukaryotic translation initiation factor 3 subunit C
tae-r.2	123113455	eukaryotic translation initiation factor 3 subunit C
tae-r.2	123105166	eukaryotic translation initiation factor 3 subunit C
tae-r.2	123103816	eukaryotic translation initiation factor 3 subunit C
hvu-r.1	123397910	eukaryotic translation initiation factor 3 subunit C-like
hvu-r.1	123452427	eukaryotic translation initiation factor 3 subunit C-like
bdi-r.1	100832515	eukaryotic translation initiation factor 3 subunit C
bdi-r.1	100820956	eukaryotic translation initiation factor 3 subunit C
bdi-r.1	100821756	eukaryotic translation initiation factor 3 subunit C
ath-u.5	EIF3C	eukaryotic translation initiation factor 3C
gma-u.5	100779751	eukaryotic translation initiation factor 3 subunit C
gma-u.5	100781967	eukaryotic translation initiation factor 3 subunit C
gma-u.5	100805203	eukaryotic translation initiation factor 3 subunit C
sly-u.5	101248584	eukaryotic translation initiation factor 3 subunit C
sly-u.5	101253539	eukaryotic translation initiation factor 3 subunit C-like
sly-u.5	101253839	eukaryotic translation initiation factor 3 subunit C-like
bra-r.6	103841520	eukaryotic translation initiation factor 3 subunit C
bra-r.6	103841725	eukaryotic translation initiation factor 3 subunit C
bra-r.6	103852186	eukaryotic translation initiation factor 3 subunit C
vvi-u.5	100252123	eukaryotic translation initiation factor 3 subunit C
ppo-u.5	7488054	eukaryotic translation initiation factor 3 subunit C
ppo-u.5	7485618	eukaryotic translation initiation factor 3 subunit C
ppo-u.5	7496901	eukaryotic translation initiation factor 3 subunit C
mtr-u.5	11419223	eukaryotic translation initiation factor 3 subunit C
mtr-u.5	11432846	eukaryotic translation initiation factor 3 subunit C-like
mtr-u.5	11428517	eukaryotic translation initiation factor 3 subunit C-like
ghi-r.1	107889471	eukaryotic translation initiation factor 3 subunit C
ghi-r.1	107891224	eukaryotic translation initiation factor 3 subunit C
ghi-r.1	107889472	eukaryotic translation initiation factor 3 subunit C
bna-r.1	106405676	eukaryotic translation initiation factor 3 subunit C
bna-r.1	106432305	eukaryotic translation initiation factor 3 subunit C
bna-r.1	106404848	eukaryotic translation initiation factor 3 subunit C
sot-r.1	102595553	eukaryotic translation initiation factor 3 subunit C-like
sot-r.1	102595694	eukaryotic translation initiation factor 3 subunit C-like
cit-r.1	102623750	eukaryotic translation initiation factor 3 subunit C
nta-r.1	107822476	eukaryotic translation initiation factor 3 subunit C
nta-r.1	107777604	eukaryotic translation initiation factor 3 subunit C-like
nta-r.1	107786728	eukaryotic translation initiation factor 3 subunit C-like
cre-r.1	CHLRE_04g217550v5	uncharacterized protein

Top 50 coexpressed genes to 8055872 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8055872 (sbi-r.1 coexpression data)

CoexMap"8055872"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006413 [list] [network] translational initiation

(45 genes)

IEA

GO CC

GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex

(18 genes)

IEA

GO MF

GO:0031369 [list] [network] translation initiation factor binding	(14 genes)	IEA
GO:0003743 [list] [network] translation initiation factor activity	(59 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1243 genes)	IEA

Protein

XP_002460451.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 4

(predict for XP_002460451.2)

Subcellular
localization
TargetP

other 8

(predict for XP_002460451.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8055872	sbi-r.1 for 8077865	zma-u.5 for 103632933	zma-u.5 for 103646106	zma-u.5 for 100502419	osa-u.5 for 4342306	osa-u.5 for 4328137	tae-r.2 for 123113455	tae-r.2 for 123105166	tae-r.2 for 123103816	hvu-r.1 for 123397910	hvu-r.1 for 123452427	bdi-r.1 for 100832515	bdi-r.1 for 100820956	bdi-r.1 for 100821756	ath-u.5 for EIF3C	gma-u.5 for 100779751	gma-u.5 for 100781967	gma-u.5 for 100805203	sly-u.5 for 101248584	sly-u.5 for 101253539	sly-u.5 for 101253839	bra-r.6 for 103841520	bra-r.6 for 103841725	bra-r.6 for 103852186	vvi-u.5 for 100252123	ppo-u.5 for 7488054	ppo-u.5 for 7485618	ppo-u.5 for 7496901	mtr-u.5 for 11419223	mtr-u.5 for 11432846	mtr-u.5 for 11428517	ghi-r.1 for 107889471	ghi-r.1 for 107891224	ghi-r.1 for 107889472	bna-r.1 for 106405676	bna-r.1 for 106432305	bna-r.1 for 106404848	sot-r.1 for 102595553	sot-r.1 for 102595694	cit-r.1 for 102623750	nta-r.1 for 107822476	nta-r.1 for 107777604	nta-r.1 for 107786728	cre-r.1 for CHLRE_04g217550v5

Ortholog

Ortholog ID: 3109

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

EIF3C

Function^*