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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8057350   constitutive photomorphogenesis protein 10 
 zma-u.5   100282225   ubiquitin-conjugating enzyme E2 E3 
 zma-u.5   100280942   ubiquitin-conjugating enzyme E2 E3 
 osa-u.5   4343707   constitutive photomorphogenesis protein 10 
 tae-r.2   123044448   constitutive photomorphogenesis protein 10 
 hvu-r.1   123425581   constitutive photomorphogenesis protein 10 
 bdi-r.1   100844544   constitutive photomorphogenesis protein 10 
 ath-u.5   FUS9   Ubiquitin-conjugating enzyme family protein 
 gma-u.5   COP10   constitutive photomorphogenesis protein 10 
 bra-r.6   103870120   constitutive photomorphogenesis protein 10 
 vvi-u.5   104879594   constitutive photomorphogenesis protein 10 
 ppo-u.5   7472701   constitutive photomorphogenesis protein 10 
 mtr-u.5   11405204   constitutive photomorphogenesis protein 10 
 ghi-r.1   107901988   constitutive photomorphogenesis protein 10 
 ghi-r.1   107962937   constitutive photomorphogenesis protein 10 
 bna-r.1   106440601   constitutive photomorphogenesis protein 10 
 bna-r.1   106452287   constitutive photomorphogenesis protein 10-like 
 sot-r.1   102601850   constitutive photomorphogenesis protein 10 
 cit-r.1   102610947   constitutive photomorphogenesis protein 10 

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Top 50 coexpressed genes to 8057350 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8057350 (sbi-r.1 coexpression data)

CoexMap"8057350"


sbiLOC8057350 | Entrez gene ID : 8057350      
Species sbi zma osa tae hvu bdi ath gma bra vvi ppo mtr ghi bna sot cit cre nta sly
Paralog 1 2 1 1 1 1 1 1 1 1 1 1 2 2 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04120 [list] [network] Ubiquitin mediated proteolysis (153 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (65 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (19 genes)  IEA  
Protein XP_002460915.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto_nucl 2,  cyto 1,  mito 1  (predict for XP_002460915.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002460915.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8057350
zma-u.5
for
100282225
zma-u.5
for
100280942
osa-u.5
for
4343707
tae-r.2
for
123044448
hvu-r.1
for
123425581
bdi-r.1
for
100844544
ath-u.5
for
FUS9
gma-u.5
for
COP10
bra-r.6
for
103870120
vvi-u.5
for
104879594
ppo-u.5
for
7472701
mtr-u.5
for
11405204
ghi-r.1
for
107901988
ghi-r.1
for
107962937
bna-r.1
for
106440601
bna-r.1
for
106452287
sot-r.1
for
102601850
cit-r.1
for
102610947


Ortholog ID: 12427
Species sbi zma zma osa tae hvu bdi ath gma bra vvi ppo mtr ghi ghi bna bna sot cit
Symbol LOC8057350 LOC100282225 LOC100280942 LOC4343707 LOC123044448 LOC123425581 LOC100844544 FUS9 COP10 LOC103870120 LOC104879594 LOC7472701 LOC11405204 LOC107901988 LOC107962937 LOC106440601 LOC106452287 LOC102601850 LOC102610947
Function* constitutive photomorphogenesis protein 10 ubiquitin-conjugating enzyme E2 E3 ubiquitin-conjugating enzyme E2 E3 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 Ubiquitin-conjugating enzyme family protein constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10-like constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 4
osa03420 Nucleotide excision repair 3
osa03082 ATP-dependent chromatin remodeling 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00270 Cysteine and methionine metabolism 2
gma00543 Exopolysaccharide biosynthesis 2
gma00920 Sulfur metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00480 Glutathione metabolism 2
bra04120 Ubiquitin mediated proteolysis 2
bra00230 Purine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8057350 100282225 100280942 4343707 123044448 123425581 100844544 820557 100527196 103870120 104879594 7472701 11405204 107901988 107962937 106440601 106452287 102601850 102610947
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