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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100844544   constitutive photomorphogenesis protein 10 
 osa-u.5   4343707   constitutive photomorphogenesis protein 10 
 zma-u.5   100282225   ubiquitin-conjugating enzyme E2 E3 
 zma-u.5   100280942   ubiquitin-conjugating enzyme E2 E3 
 ath-u.5   FUS9   Ubiquitin-conjugating enzyme family protein 
 gma-u.5   COP10   constitutive photomorphogenesis protein 10 
 vvi-u.5   104879594   constitutive photomorphogenesis protein 10 
 ppo-u.5   7472701   constitutive photomorphogenesis protein 10 
 mtr-u.5   11405204   constitutive photomorphogenesis protein 10 

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Top 50 coexpressed genes to 100844544 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100844544 (bdi-r.1 coexpression data)

CoexMap"100844544"


bdiLOC100844544 | Entrez gene ID : 100844544      
Species bdi osa zma ath gma vvi ppo mtr hvu sot tae nta bra cit ghi bna sly sbi cre
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04120 [list] [network] Ubiquitin mediated proteolysis (156 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (68 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (26 genes)  IEA  
Protein XP_003562836.1 [sequence] [blastp]
XP_014752419.1 [sequence] [blastp]
XP_014752420.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1  (predict for XP_003562836.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_014752419.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_014752420.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003562836.1)
chlo 8  (predict for XP_014752419.1)
chlo 8  (predict for XP_014752420.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100844544

.
osa-u.5
for
4343707

.
zma-u.5
for
100282225

.
zma-u.5
for
100280942

.
ath-u.5
for
FUS9

.
gma-u.5
for
COP10

.
vvi-u.5
for
104879594

.
ppo-u.5
for
7472701

.
mtr-u.5
for
11405204

.


Ortholog ID: 12427
Species ath gma osa zma zma bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi
Symbol FUS9 COP10 LOC4343707 LOC100280942 LOC100282225 LOC103870120 LOC104879594 LOC7472701 LOC11405204 LOC123044448 LOC123425581 LOC107901988 LOC107962937 LOC106452287 LOC106440601 LOC8057350 LOC102601850 LOC102610947 LOC100844544
Function* Ubiquitin-conjugating enzyme family protein constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 ubiquitin-conjugating enzyme E2 E3 ubiquitin-conjugating enzyme E2 E3 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10-like constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10 constitutive photomorphogenesis protein 10
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00270 Cysteine and methionine metabolism 2
gma00543 Exopolysaccharide biosynthesis 2
gma00920 Sulfur metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 4
osa03420 Nucleotide excision repair 3
osa03082 ATP-dependent chromatin remodeling 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00480 Glutathione metabolism 2
bra04120 Ubiquitin mediated proteolysis 2
bra00230 Purine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820557 100527196 4343707 100280942 100282225 103870120 104879594 7472701 11405204 123044448 123425581 107901988 107962937 106452287 106440601 8057350 102601850 102610947 100844544
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