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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059768   E3 ubiquitin-protein ligase At1g12760 
 sbi-r.1   110436552   E3 ubiquitin-protein ligase At1g12760-like 
 zma-u.5   100284889   protein binding protein 
 zma-u.5   100284185   uncharacterized LOC100284185 
 zma-u.5   100281150   protein binding protein 
 osa-u.5   4330296   E3 ubiquitin-protein ligase At1g12760 
 osa-u.5   4343169   E3 ubiquitin-protein ligase At1g12760 
 tae-r.2   123190037   E3 ubiquitin-protein ligase At1g12760 
 tae-r.2   123127980   E3 ubiquitin-protein ligase At1g63170 
 tae-r.2   123137647   E3 ubiquitin-protein ligase At1g63170 
 hvu-r.1   123402345   E3 ubiquitin-protein ligase At1g63170-like 
 hvu-r.1   123427477   E3 ubiquitin-protein ligase At1g12760-like 
 bdi-r.1   100842859   E3 ubiquitin-protein ligase At1g63170 
 bdi-r.1   100838067   E3 ubiquitin-protein ligase At1g12760 
 bdi-r.1   100842139   E3 ubiquitin-protein ligase At1g63170 
 ath-u.5   AT3G61180   RING/U-box superfamily protein 
 ath-u.5   AT4G11680   Zinc finger, C3HC4 type (RING finger) family protein 
 ath-u.5   AT1G12760   Zinc finger, C3HC4 type (RING finger) family protein 
 gma-u.5   100776124   E3 ubiquitin-protein ligase At1g12760 
 gma-u.5   100779757   E3 ubiquitin-protein ligase At1g12760 
 gma-u.5   100785943   E3 ubiquitin-protein ligase At1g63170 
 sly-u.5   101263708   E3 ubiquitin-protein ligase At1g63170 
 sly-u.5   101258191   E3 ubiquitin-protein ligase At1g12760 
 bra-r.6   103849820   E3 ubiquitin-protein ligase At4g11680 
 bra-r.6   103843105   E3 ubiquitin-protein ligase At1g12760 
 bra-r.6   103249158   E3 ubiquitin-protein ligase At4g11680 
 vvi-u.5   100243778   E3 ubiquitin-protein ligase At1g12760 
 vvi-u.5   100251339   E3 ubiquitin-protein ligase At1g12760 
 ppo-u.5   7461748   E3 ubiquitin-protein ligase At1g63170 
 ppo-u.5   7464889   E3 ubiquitin-protein ligase At1g63170 
 ppo-u.5   7465844   E3 ubiquitin-protein ligase At1g12760 
 mtr-u.5   11423485   E3 ubiquitin-protein ligase At1g63170 
 mtr-u.5   25493663   E3 ubiquitin-protein ligase At1g12760 
 mtr-u.5   11441007   E3 ubiquitin-protein ligase At1g12760 
 ghi-r.1   107910894   E3 ubiquitin-protein ligase At4g11680 
 ghi-r.1   107924788   E3 ubiquitin-protein ligase At4g11680 
 ghi-r.1   107926967   E3 ubiquitin-protein ligase At4g11680 
 bna-r.1   106445564   E3 ubiquitin-protein ligase At1g12760 
 bna-r.1   106410766   E3 ubiquitin-protein ligase At1g63170 
 bna-r.1   106401879   E3 ubiquitin-protein ligase At1g12760 
 sot-r.1   102586651   E3 ubiquitin-protein ligase At1g12760-like 
 sot-r.1   102586579   E3 ubiquitin-protein ligase At1g63170-like 
 cit-r.1   127900992   E3 ubiquitin-protein ligase At1g63170-like 
 cit-r.1   102628690   E3 ubiquitin-protein ligase At1g63170 
 cit-r.1   102617680   E3 ubiquitin-protein ligase At1g12760-like 
 nta-r.1   107781587   E3 ubiquitin-protein ligase At1g63170 
 nta-r.1   107799834   E3 ubiquitin-protein ligase At1g63170-like 
 nta-r.1   107821029   E3 ubiquitin-protein ligase At4g11680-like 

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Top 50 coexpressed genes to 8059768 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059768 (sbi-r.1 coexpression data)

CoexMap"8059768"


sbiLOC8059768 | Entrez gene ID : 8059768      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 3 2 3 3 3 2 3 2 3 3 3 3 2 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002459812.1 [sequence] [blastp]
XP_021309768.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  plas 1,  cyto_plas 1  (predict for XP_002459812.1)
chlo 6,  chlo_mito 4,  plas 1,  cyto_plas 1  (predict for XP_021309768.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002459812.1)
chlo 9  (predict for XP_021309768.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059768
sbi-r.1
for
110436552
zma-u.5
for
100284889
zma-u.5
for
100284185
zma-u.5
for
100281150
osa-u.5
for
4330296
osa-u.5
for
4343169
tae-r.2
for
123190037
tae-r.2
for
123127980
tae-r.2
for
123137647
hvu-r.1
for
123402345
hvu-r.1
for
123427477
bdi-r.1
for
100842859
bdi-r.1
for
100838067
bdi-r.1
for
100842139
ath-u.5
for
AT3G61180
ath-u.5
for
AT4G11680
ath-u.5
for
AT1G12760
gma-u.5
for
100776124
gma-u.5
for
100779757
gma-u.5
for
100785943
sly-u.5
for
101263708
sly-u.5
for
101258191
bra-r.6
for
103849820
bra-r.6
for
103843105
bra-r.6
for
103249158
vvi-u.5
for
100243778
vvi-u.5
for
100251339
ppo-u.5
for
7461748
ppo-u.5
for
7464889
ppo-u.5
for
7465844
mtr-u.5
for
11423485
mtr-u.5
for
25493663
mtr-u.5
for
11441007
ghi-r.1
for
107910894
ghi-r.1
for
107924788
ghi-r.1
for
107926967
bna-r.1
for
106445564
bna-r.1
for
106410766
bna-r.1
for
106401879
sot-r.1
for
102586651
sot-r.1
for
102586579
cit-r.1
for
127900992
cit-r.1
for
102628690
cit-r.1
for
102617680
nta-r.1
for
107781587
nta-r.1
for
107799834
nta-r.1
for
107821029


Ortholog ID: 1319
Species sbi sbi zma zma zma osa osa tae tae tae hvu hvu bdi bdi bdi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit cit nta nta nta
Symbol LOC8059768 LOC110436552 LOC100284185 LOC103647287 LOC100191292 LOC4330296 LOC4343169 LOC123190037 LOC123137647 LOC123054144 LOC123402345 LOC123427477 LOC100842859 LOC100838067 LOC100842139 AT4G11680 AT1G12760 AT1G63170 LOC100785943 LOC100795425 LOC102670411 LOC101263708 LOC101258191 LOC103843105 LOC103249158 LOC103838294 LOC100243778 LOC100251339 LOC7461748 LOC7464889 LOC7465844 LOC11423485 LOC25493663 LOC11441007 LOC107924788 LOC107957260 LOC107963758 LOC106410766 LOC106382380 LOC106412558 LOC102586651 LOC102586579 LOC127900992 LOC102628690 LOC102617680 LOC107781587 LOC107799834 LOC107808687
Function* E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760-like uncharacterized LOC100284185 E3 ubiquitin-protein ligase uncharacterized LOC100191292 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g63170 Zinc finger, C3HC4 type (RING finger) family protein Zinc finger, C3HC4 type (RING finger) family protein Zinc finger, C3HC4 type (RING finger) family protein E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g63170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 3
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 3
bdi04144 Endocytosis 2
bdi04145 Phagosome 2
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04148 Efferocytosis 3
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00062 Fatty acid elongation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00053 Ascorbate and aldarate metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi03272 Virion - Hepatitis viruses 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 12
ppo04075 Plant hormone signal transduction 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr04626 Plant-pathogen interaction 4
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01212 Fatty acid metabolism 3
mtr00061 Fatty acid biosynthesis 2
mtr00620 Pyruvate metabolism 2
mtr00640 Propanoate metabolism 2
mtr00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta00592 alpha-Linolenic acid metabolism 3
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 4
nta00591 Linoleic acid metabolism 2
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta00280 Valine, leucine and isoleucine degradation 3
nta00350 Tyrosine metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8059768 110436552 100284185 103647287 100191292 4330296 4343169 123190037 123137647 123054144 123402345 123427477 100842859 100838067 100842139 826773 837832 842621 100785943 100795425 102670411 101263708 101258191 103843105 103249158 103838294 100243778 100251339 7461748 7464889 7465844 11423485 25493663 11441007 107924788 107957260 107963758 106410766 106382380 106412558 102586651 102586579 127900992 102628690 102617680 107781587 107799834 107808687
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