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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8064000   pentatricopeptide repeat-containing protein At3g42630 
 osa-u.5   107276689   pentatricopeptide repeat-containing protein At3g42630 
 tae-r.2   123151454   pentatricopeptide repeat-containing protein At3g42630 
 hvu-r.1   123411623   pentatricopeptide repeat-containing protein At3g42630 
 bdi-r.1   104583735   pentatricopeptide repeat-containing protein At3g42630 
 ath-u.5   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100791611   pentatricopeptide repeat-containing protein 
 gma-u.5   100818684   pentatricopeptide repeat-containing protein At3g42630 
 sly-u.5   101250803   pentatricopeptide repeat-containing protein At3g42630 
 bra-r.6   103873292   pentatricopeptide repeat-containing protein At3g42630 
 vvi-u.5   100256930   pentatricopeptide repeat-containing protein At3g42630 
 ppo-u.5   18107855   pentatricopeptide repeat-containing protein At3g42630 
 mtr-u.5   25483299   pentatricopeptide repeat-containing protein At3g42630 
 mtr-u.5   25479453   pentatricopeptide repeat-containing protein At3g42630 
 ghi-r.1   107961707   pentatricopeptide repeat-containing protein At3g42630 
 ghi-r.1   107901994   pentatricopeptide repeat-containing protein At3g42630 
 bna-r.1   106347552   pentatricopeptide repeat-containing protein At3g42630-like 
 bna-r.1   106376275   pentatricopeptide repeat-containing protein At3g42630 
 sot-r.1   102585336   pentatricopeptide repeat-containing protein At3g42630 
 cit-r.1   102621662   pentatricopeptide repeat-containing protein At3g42630 
 nta-r.1   107820793   pentatricopeptide repeat-containing protein At3g42630-like 
 nta-r.1   107781855   pentatricopeptide repeat-containing protein At3g42630 

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Top 50 coexpressed genes to 8064000 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8064000 (sbi-r.1 coexpression data)

CoexMap"8064000"


sbiLOC8064000 | Entrez gene ID : 8064000    
Species sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre zma
Paralog 1 1 1 1 1 1 2 1 1 1 1 2 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002445860.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  mito 1  (predict for XP_002445860.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_002445860.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8064000
osa-u.5
for
107276689
tae-r.2
for
123151454
hvu-r.1
for
123411623
bdi-r.1
for
104583735
ath-u.5
for
AT3G42630
gma-u.5
for
100791611
gma-u.5
for
100818684
sly-u.5
for
101250803
bra-r.6
for
103873292
vvi-u.5
for
100256930
ppo-u.5
for
18107855
mtr-u.5
for
25483299
mtr-u.5
for
25479453
ghi-r.1
for
107961707
ghi-r.1
for
107901994
bna-r.1
for
106347552
bna-r.1
for
106376275
sot-r.1
for
102585336
cit-r.1
for
102621662
nta-r.1
for
107820793
nta-r.1
for
107781855


Ortholog ID: 10803
Species sbi osa tae hvu bdi ath gma gma sly bra vvi ppo mtr mtr ghi ghi bna bna sot cit nta nta
Symbol LOC8064000 LOC107276689 LOC123151454 LOC123411623 LOC104583735 AT3G42630 LOC100791611 LOC100818684 LOC101250803 LOC103873292 LOC100256930 LOC18107855 LOC25483299 LOC25479453 LOC107961707 LOC107901994 LOC106347552 LOC106376275 LOC102585336 LOC102621662 LOC107820793 LOC107781855
Function* pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630-like pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630-like pentatricopeptide repeat-containing protein At3g42630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 8
ath01200 Carbon metabolism 8
ath00010 Glycolysis / Gluconeogenesis 7
ath00020 Citrate cycle (TCA cycle) 5
ath00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly01240 Biosynthesis of cofactors 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8064000 107276689 123151454 123411623 104583735 823280 100791611 100818684 101250803 103873292 100256930 18107855 25483299 25479453 107961707 107901994 106347552 106376275 102585336 102621662 107820793 107781855
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