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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT3G42630   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100818684   pentatricopeptide repeat-containing protein At3g42630 
 gma-u.5   100791611   pentatricopeptide repeat-containing protein 
 vvi-u.5   100256930   pentatricopeptide repeat-containing protein At3g42630 
 ppo-u.5   18107855   pentatricopeptide repeat-containing protein At3g42630 
 mtr-u.5   25483299   pentatricopeptide repeat-containing protein At3g42630 
 mtr-u.5   25479453   pentatricopeptide repeat-containing protein At3g42630 
 sly-u.5   101250803   pentatricopeptide repeat-containing protein At3g42630 
 osa-u.5   107276689   pentatricopeptide repeat-containing protein At3g42630 

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Top 50 coexpressed genes to AT3G42630 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G42630 (ath-u.5 coexpression data)

CoexMap"823280"


athAT3G42630 | Entrez gene ID : 823280      
Species ath gma vvi ppo mtr sly osa tae hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_566863.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_566863.2)
Subcellular
localization
TargetP
other 3  (predict for NP_566863.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G42630

.
ath-r.7
for
AT3G42630

.
ath-m.9
for
AT3G42630

.
ath-e.2
for
AT3G42630

.
ath-m.4.bio
for
AT3G42630

.
ath-m.4.hor
for
AT3G42630

.
ath-m.4.lig
for
AT3G42630

.
ath-m.4.str
for
AT3G42630

.
ath-m.4.tis
for
AT3G42630

.
gma-u.5
for
100818684

.
gma-u.5
for
100791611

.
vvi-u.5
for
100256930

.
ppo-u.5
for
18107855

.
mtr-u.5
for
25483299

.
mtr-u.5
for
25479453

.
sly-u.5
for
101250803

.
osa-u.5
for
107276689

.


Ortholog ID: 10803
Species ath gma gma sly osa bra vvi ppo mtr mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G42630 LOC100791611 LOC100818684 LOC101250803 LOC107276689 LOC103873292 LOC100256930 LOC18107855 LOC25479453 LOC25483299 LOC123151454 LOC123411623 LOC107901994 LOC107961707 LOC106347552 LOC106376275 LOC8064000 LOC102585336 LOC102621662 LOC104583735 LOC107781855 LOC107820793
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630-like pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630 pentatricopeptide repeat-containing protein At3g42630-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 8
ath01200 Carbon metabolism 8
ath00010 Glycolysis / Gluconeogenesis 7
ath00020 Citrate cycle (TCA cycle) 5
ath00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly01240 Biosynthesis of cofactors 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823280 100791611 100818684 101250803 107276689 103873292 100256930 18107855 25479453 25483299 123151454 123411623 107901994 107961707 106347552 106376275 8064000 102585336 102621662 104583735 107781855 107820793
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