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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8064058   auxin response factor 24 
 sbi-r.1   8081300   auxin response factor 4 
 sbi-r.1   8070929   auxin response factor 4 
 sbi-r.1   110435301   auxin response factor 23-like 
 zma-u.5   100273544   Auxin response factor 2 
 zma-u.5   100273501   uncharacterized LOC100273501 
 zma-u.5   100383196   uncharacterized LOC100383196 
 osa-u.5   4352211   auxin response factor 24-like 
 osa-u.5   4350610   auxin response factor 23-like 
 osa-u.5   4326957   auxin response factor 4-like 
 tae-r.2   123063198   auxin response factor 4 
 tae-r.2   123072105   auxin response factor 4 
 tae-r.2   123063246   auxin response factor 4 
 hvu-r.1   123445313   auxin response factor 4-like 
 hvu-r.1   123445343   auxin response factor 4-like 
 bdi-r.1   100841363   auxin response factor 24 
 bdi-r.1   100823699   auxin response factor 23 
 bdi-r.1   100834181   auxin response factor 4 
 ath-u.5   ARF2   auxin response factor 2 
 gma-u.5   100780892   auxin response factor 2B 
 gma-u.5   100797082   auxin response factor 2B 
 gma-u.5   100803498   auxin response factor 2B 
 sly-u.5   ARF2B   auxin response factor 2B 
 sly-u.5   ARF2A   auxin response factor 2A 
 bra-r.6   ARF2-2   auxin response factor 2 
 bra-r.6   ARF2-1   auxin response factor 2 
 bra-r.6   ARF2-3   auxin response factor 2 
 vvi-u.5   100268072   auxin response factor 2B 
 vvi-u.5   100250592   auxin response factor 2A 
 ppo-u.5   7456643   auxin response factor 2 
 ppo-u.5   7484881   auxin response factor 2 
 mtr-u.5   11439423   auxin response factor 2B 
 ghi-r.1   107944673   auxin response factor 2 
 ghi-r.1   121219292   auxin response factor 2B 
 ghi-r.1   121232023   auxin response factor 2B 
 bna-r.1   106421920   auxin response factor 2-like 
 bna-r.1   106382765   auxin response factor 2 
 bna-r.1   111209353   auxin response factor 2 
 sot-r.1   102594206   auxin response factor 2-like 
 sot-r.1   102582348   auxin response factor 2-like 
 cit-r.1   ARF   auxin-response factor 
 nta-r.1   107798348   auxin response factor 2A 
 nta-r.1   107804166   auxin response factor 2B 
 nta-r.1   107789425   auxin response factor 2B 

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Top 50 coexpressed genes to 8064058 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8064058 (sbi-r.1 coexpression data)

CoexMap"8064058"


sbiLOC8064058 | Entrez gene ID : 8064058      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 3 3 2 3 1 3 2 3 2 2 1 3 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04075 [list] [network] Plant hormone signal transduction (389 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (328 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1596 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (1849 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002443175.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002443175.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002443175.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8064058
sbi-r.1
for
8081300
sbi-r.1
for
8070929
sbi-r.1
for
110435301
zma-u.5
for
100273544
zma-u.5
for
100273501
zma-u.5
for
100383196
osa-u.5
for
4352211
osa-u.5
for
4350610
osa-u.5
for
4326957
tae-r.2
for
123063198
tae-r.2
for
123072105
tae-r.2
for
123063246
hvu-r.1
for
123445313
hvu-r.1
for
123445343
bdi-r.1
for
100841363
bdi-r.1
for
100823699
bdi-r.1
for
100834181
ath-u.5
for
ARF2
gma-u.5
for
100780892
gma-u.5
for
100797082
gma-u.5
for
100803498
sly-u.5
for
ARF2B
sly-u.5
for
ARF2A
bra-r.6
for
ARF2-2
bra-r.6
for
ARF2-1
bra-r.6
for
ARF2-3
vvi-u.5
for
100268072
vvi-u.5
for
100250592
ppo-u.5
for
7456643
ppo-u.5
for
7484881
mtr-u.5
for
11439423
ghi-r.1
for
107944673
ghi-r.1
for
121219292
ghi-r.1
for
121232023
bna-r.1
for
106421920
bna-r.1
for
106382765
bna-r.1
for
111209353
sot-r.1
for
102594206
sot-r.1
for
102582348
cit-r.1
for
ARF
nta-r.1
for
107798348
nta-r.1
for
107804166
nta-r.1
for
107789425


Ortholog ID: 2854
Species sbi sbi sbi zma zma zma osa osa osa tae tae tae hvu hvu bdi bdi bdi ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC8064058 LOC8081300 LOC8070929 LOC100273544 LOC100273501 LOC100274564 LOC4352211 LOC4350610 LOC4326957 LOC123063198 LOC123072105 LOC606348 LOC123445313 LOC123445343 LOC100841363 LOC100823699 LOC100834181 ARF2 LOC100780892 LOC100797082 LOC100815956 ARF2B ARF2A ARF2-2 ARF2-1 ARF2-3 LOC100268072 LOC100250592 LOC7456643 LOC7484881 LOC11439423 LOC121219292 LOC121232023 LOC107946610 LOC111209353 LOC106379011 LOC106366087 LOC102594206 LOC102582348 ARF LOC107798348 LOC107804166 LOC107831629
Function* auxin response factor 24 auxin response factor 4 auxin response factor 4 Auxin response factor 2 uncharacterized LOC100273501 auxin response factor auxin response factor 24-like auxin response factor 23-like auxin response factor 4-like auxin response factor 4 auxin response factor 4 auxin response factor 4 auxin response factor 4-like auxin response factor 4-like auxin response factor 24 auxin response factor 23 auxin response factor 4 auxin response factor 2 auxin response factor 2B auxin response factor 2B auxin response factor 2B auxin response factor 2B auxin response factor 2A auxin response factor 2 auxin response factor 2 auxin response factor 2 auxin response factor 2B auxin response factor 2A auxin response factor 2 auxin response factor 2 auxin response factor 2B auxin response factor 2B auxin response factor 2B auxin response factor 2A auxin response factor 2 auxin response factor 2-like auxin response factor 2-like auxin response factor 2-like auxin response factor 2-like auxin-response factor auxin response factor 2A auxin response factor 2B auxin response factor 2A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03040 Spliceosome 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
ghi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8064058 8081300 8070929 100273544 100273501 100274564 4352211 4350610 4326957 123063198 123072105 606348 123445313 123445343 100841363 100823699 100834181 836321 100780892 100797082 100815956 101249712 778240 103874638 103854970 103837398 100268072 100250592 7456643 7484881 11439423 121219292 121232023 107946610 111209353 106379011 106366087 102594206 102582348 102577963 107798348 107804166 107831629
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