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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107798348   auxin response factor 2A 
 sly-u.5   ARF2B   auxin response factor 2B 
 sly-u.5   ARF2A   auxin response factor 2A 
 ath-u.5   ARF2   auxin response factor 2 
 gma-u.5   100780892   auxin response factor 2B 
 gma-u.5   100797082   auxin response factor 2B 
 gma-u.5   100803498   auxin response factor 2B 
 vvi-u.5   100250592   auxin response factor 2A 
 vvi-u.5   100268072   auxin response factor 2B 
 ppo-u.5   7456643   auxin response factor 2 
 ppo-u.5   7484881   auxin response factor 2 
 mtr-u.5   11439423   auxin response factor 2B 
 osa-u.5   4352211   auxin response factor 24-like 
 osa-u.5   4350610   auxin response factor 23-like 
 osa-u.5   4326957   auxin response factor 4-like 
 zma-u.5   100273501   uncharacterized LOC100273501 
 zma-u.5   100383196   uncharacterized LOC100383196 
 zma-u.5   100274571   Auxin response factor 10 

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Top 50 coexpressed genes to 107798348 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107798348 (nta-r.1 coexpression data)

CoexMap"107798348"


ntaLOC107798348 | Entrez gene ID : 107798348      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 2 1 3 2 2 1 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta04075 [list] [network] Plant hormone signal transduction (826 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (688 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2987 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (3714 genes)  IEA  
Protein XP_016476812.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016476812.2)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_016476812.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107798348
sly-u.5
for
ARF2B
sly-u.5
for
ARF2A
ath-u.5
for
ARF2
gma-u.5
for
100780892
gma-u.5
for
100797082
gma-u.5
for
100803498
vvi-u.5
for
100250592
vvi-u.5
for
100268072
ppo-u.5
for
7456643
ppo-u.5
for
7484881
mtr-u.5
for
11439423
osa-u.5
for
4352211
osa-u.5
for
4350610
osa-u.5
for
4326957
zma-u.5
for
100273501
zma-u.5
for
100383196
zma-u.5
for
100274571


Ortholog ID: 2854
Species nta nta sly sly sot sot ath gma gma bra bra vvi vvi ppo ppo mtr ghi ghi bna bna cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107804166 LOC107798348 ARF2A ARF2B LOC102582348 LOC102594206 ARF2 LOC100815956 LOC100780892 ARF2-2 ARF2-1 LOC100268072 LOC100250592 LOC7456643 LOC7484881 LOC11439423 LOC107946610 LOC121232023 LOC106379011 LOC106366087 ARF LOC4326957 LOC4350610 LOC100273501 LOC100274564 LOC123072105 LOC606348 LOC123445313 LOC123445343 LOC8070929 LOC8064058 LOC100834181 LOC100823699
Function* auxin response factor 2B auxin response factor 2A auxin response factor 2A auxin response factor 2B auxin response factor 2-like auxin response factor 2-like auxin response factor 2 auxin response factor 2B auxin response factor 2B auxin response factor 2 auxin response factor 2 auxin response factor 2B auxin response factor 2A auxin response factor 2 auxin response factor 2 auxin response factor 2B auxin response factor 2A auxin response factor 2B auxin response factor 2-like auxin response factor 2-like auxin-response factor auxin response factor 4-like auxin response factor 23-like uncharacterized LOC100273501 auxin response factor auxin response factor 4 auxin response factor 4 auxin response factor 4-like auxin response factor 4-like auxin response factor 4 auxin response factor 24 auxin response factor 4 auxin response factor 23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
ghi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107804166 107798348 778240 101249712 102582348 102594206 836321 100815956 100780892 103874638 103854970 100268072 100250592 7456643 7484881 11439423 107946610 121232023 106379011 106366087 102577963 4326957 4350610 100273501 100274564 123072105 606348 123445313 123445343 8070929 8064058 100834181 100823699
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